Gene Information

Name : B446_06540 (B446_06540)
Accession : YP_008384943.1
Strain : Streptomyces collinus Tu 365
Genome accession: NC_021985
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1560737 - 1561549 bp
Length : 813 bp
Strand : +
Note : COG1136 ABC-type antimicrobial peptide transport system, ATPase component

DNA sequence :
TTGTCCACAGCAGCTGCGGAGCACGCGCCGGGGCGTGCACCGGACGGCGGGATCGCGGCCCGCGCGCGCGGGCTGACCAA
GGCGTACGGCTCGGGCGAGACGGCGGTGCTCGCCCTGGACTCGGTGGACGTGGACATCGCGCGCGGCCGGTTCACCGCCG
TGATGGGCCCCTCGGGTTCGGGCAAGTCCACGCTGATGCACTGTCTGGCGGGCCTCGACGACGTGTCGGCCGGTCAGGTG
TGGCTCGGCGACACGGAGATCACCGGTCTGAAGGAGCGGGAGCTGACCCGGCTCAGGCGGGACCGGATCGGGTTCATGTT
CCAGTCGTTCAACCTCATCCCGACGCTGAACGCGGCGGAGAACATCACCCTGCCGATGAACATCGCGGGCCGCAGGCCCG
ACGAGAAGTGGCTGGACCAGGTCATAGACACCCTCGGGCTGCGCGCGCGGCTGACCCACCGCCCGGCCCAGCTCTCCGGC
GGACAGCAGCAACGCGTCGCGTGCGCACGGGCGCTGGCCTCGCGTCCCGAGCTCATCTTCGCCGACGAGCCGACCGGAAA
CCTGGACTCGCGGGCGGGTCTGGAGGTCCTGGGCTTCCTGCGCGACGCCGTGGACGACCTCGGGCAGACCGTCGTGATGG
TCACCCACGACCCGGGCGCCGCCGCCCACTCCGACCTGGTGCTGTTCCTCGCCGACGGGCGGATCGTGGACGAGATGGAG
CGCCCGACGGCGGACGCCGTGCTCGAACGCATGAAGGCCTTCGACGCGGTGCGCGGACGGCGCGGCGGCGACGCCGGCGC
CCGGGAGGACTGA

Protein sequence :
MSTAAAEHAPGRAPDGGIAARARGLTKAYGSGETAVLALDSVDVDIARGRFTAVMGPSGSGKSTLMHCLAGLDDVSAGQV
WLGDTEITGLKERELTRLRRDRIGFMFQSFNLIPTLNAAENITLPMNIAGRRPDEKWLDQVIDTLGLRARLTHRPAQLSG
GQQQRVACARALASRPELIFADEPTGNLDSRAGLEVLGFLRDAVDDLGQTVVMVTHDPGAAAHSDLVLFLADGRIVDEME
RPTADAVLERMKAFDAVRGRRGGDAGARED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-37 43
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 3e-40 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-40 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B446_06540 YP_008384943.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-46 45
B446_06540 YP_008384943.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 3e-38 45
B446_06540 YP_008384943.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 6e-46 44
B446_06540 YP_008384943.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 2e-40 41