Gene Information

Name : araD (I137_20970)
Accession : YP_008383482.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.4
Position : 4486680 - 4487366 bp
Length : 687 bp
Strand : +
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGCAAAAGCTCAAGCAGCAGGTATTTGACGCTAACATGGATTTGCCCCGTTATGGACTGGTGACGTTTACCTGGGGCAA
CGTCAGCGCTATCGATCGCGAACGCGGGCTGGTGGTGATTAAGCCAAGCGGTGTCGCCTATGAAACCATGAAGGTAGATG
ACATGGTGGTGGTGGATATGGATGGCAAAGTGGTGGAGGGAGGTTATCGTCCTTCTTCCGATACCGCTACCCATCTGGCG
CTGTATCAACGCTATCCGTCGCTTGGCGGCGTCGTTCATACCCACTCCACCCACGCCACGGCATGGGCGCAGGCGGGGAT
GGCTATTCCGGCGCTCGGTACCACGCACGCGGACTATTTCTTTGGCGATATTCCTTGTACCAGGGCGTTAAGCGAAGAAG
AAGTGCAGGGCGAGTACGAGCTGAACACCGGTAAGGTGATCATCGAAACGCTGGGCGAGGTGGAACCGCTGCATACGCCA
GGCATTGTGGTGTATCAACACGGGCCGTTCGCCTGGGGGAAAGATGCGCACGATGCGGTACATAACGCGGTCGTCATGGA
GGAAGTGGCGCGAATGGCGTGGATTGCGCGCGGTATTAACCCTGGCCTCAACCCCATCGACGATTATCTGATGAATAAAC
ACTTCATGCGTAAGCATGGCCCGAATGCGTATTACGGGCAGAAGTGA

Protein sequence :
MQKLKQQVFDANMDLPRYGLVTFTWGNVSAIDRERGLVVIKPSGVAYETMKVDDMVVVDMDGKVVEGGYRPSSDTATHLA
LYQRYPSLGGVVHTHSTHATAWAQAGMAIPALGTTHADYFFGDIPCTRALSEEEVQGEYELNTGKVIIETLGEVEPLHTP
GIVVYQHGPFAWGKDAHDAVHNAVVMEEVARMAWIARGINPGLNPIDDYLMNKHFMRKHGPNAYYGQK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 2e-55 56