Gene Information

Name : I137_13765 (I137_13765)
Accession : YP_008382154.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : type III secretion system protein SpaO
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2933763 - 2934674 bp
Length : 912 bp
Strand : -
Note : involved in a secretory pathway responsible for the surface presentation of determinants needed for the entry of Salmonella species into mammalian cells; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCA
GGAAGCTACGCTGGAATATCCGACGCGACAAGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCGTGGA
TTCAACCTGGGGACTGGCTTGAGCATGTCTCTCCCGCTCTGGCGGGGGCGGCGGTTTCTGCTGGCGCTGAGCACCTGGTC
GTTCCCTGGCTTGCTGCGACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA
CCCCGTGCCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAATATC
TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT
ACGCAGCGTTCGTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA
CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG
AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAATCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT
AAGAGCGTTACCCTCGCCGAACTCGAAGCCATGGGGCAGCAACAGCTATTATCACTGCCGACCAATGCTGAACTTAACGT
TGAAATTATGGCGAATGGTGTTTTGCTGGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG
AATGGCTGAGCGAGTCTGGTAATGGGGAATGA

Protein sequence :
MSLRVRQIDRREWLLAQTATECQRHGQEATLEYPTRQGMWVRLSDAEKRWSAWIQPGDWLEHVSPALAGAAVSAGAEHLV
VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEYLPELPAVGGGRPKMLRWPLRFVIGSSD
TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR
KSVTLAELEAMGQQQLLSLPTNAELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaO NP_457285.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 1e-125 99
spaO NP_806494.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 1e-125 99
spaO YP_217810.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 1e-125 99
spaO NP_461812.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 3e-126 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_13765 YP_008382154.1 type III secretion system protein SpaO VFG0552 Protein 1e-126 99