Gene Information

Name : I137_13705 (I137_13705)
Accession : YP_008382142.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : chaperone protein SicP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2923117 - 2923509 bp
Length : 393 bp
Strand : -
Note : type III secretion system chaperone; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
TTGCAAGCACACCAGGATATTATCGCTAATATTGGTGAGAAATTGGGTTTACCGCTCACTTTTGACGACAACAATCAGTG
CTTATTATTACTCGATAGCGATATTTTTACGTCTATTGAAGCTAAAGATGATATCTGGTTATTGAACGGTATGATTATAC
CGTTATCGCCTGTTTGTGGCGATTCTATCTGGCGGCAGATTATGGTGATTAATGGTGAACTGGCTGCGAATAATGAAGGT
ACGTTATCGTATATTGATGCCGCAGAGACGTTGTTGCTTATACATGCAATTACCGATCTGACAAATACTTACCATATTAT
ATCGCAGCTTGAGTCATTTGTGAATCAGCAGGAAGCGCTCAAAAACATACTGCAGGAATATGCTAAAGTATGA

Protein sequence :
MQAHQDIIANIGEKLGLPLTFDDNNQCLLLLDSDIFTSIEAKDDIWLLNGMIIPLSPVCGDSIWRQIMVINGELAANNEG
TLSYIDAAETLLLIHAITDLTNTYHIISQLESFVNQQEALKNILQEYAKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sicP NP_461800.1 secretion chaperone Virulence SPI-1 Protein 3e-54 99
sicP YP_217798.1 virulence associated chaperone Virulence SPI-1 Protein 3e-47 98
sicP NP_457273.1 chaperone (associated with virulence) Virulence SPI-1 Protein 2e-46 96
sicP NP_806482.1 chaperone Virulence SPI-1 Protein 2e-46 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_13705 YP_008382142.1 chaperone protein SicP VFG0541 Protein 9e-55 99