Gene Information

Name : I137_12505 (I137_12505)
Accession : YP_008381920.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : pili assembly chaperone protein SafB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2685082 - 2685822 bp
Length : 741 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGAAAATTATTAGTTTTGGTGTAATGGCGGCTGTTTTATTCGTCTCTAATTCTATAACTCCTCCAGTGTATGCCTCTGA
GCAGAAATTAAATTTAAACACTAAATCATTCAGCGTGAAGCTGGGGGCTACACGGGTGATTTATCACGCTGGTACAGCTG
GAGCCACGCTCTCGGTGAGCAACCCGCAGAATTACCCTATTTTGGTTCAGTCTTCAGTCAAAGCAGCAGACAAAAGTTCG
CCTGCTCCCTTTTTGGTGATGCCGCCTCTATTTCGTTTAGAAGCGAACCAGCAGAGTCAACTGCGTATTGTCCGTACTGG
TGGTGACATGCCAACGGATCGTGAGACTTTACAGTGGGTCTGTGTAAAGGCGGTACCACCCGAAAATGAACCGTCGGATA
CACAGGCTAAGGGCGCGACCCTTGACCTCAATTTGTCCATTAACGTCTGTGATAAGCTGATTTTCCGCCCGGATGCCGTG
AAGGGGACGCCGGAAGATGTTGCAGGAAATTTAAGATGGGTGGAGACGGGCAACAAACTTAAGGTGGAGAACCCCACCCC
GTTTTACATGAATTTAGCCTCCGTCACAGTAGGGGGAAAGCCCATTACAGGGCTTGAGTATATCCCCCCTTTTGCTGACA
AAACACTAAATATGCCAGGTAGTGCCCATGGTGATATCGAGTGGAGAGTTATTACAGACTTTGGTGGTGAAAGTCATCCG
TTCCACTACGTCCTTAAATAA

Protein sequence :
MKIISFGVMAAVLFVSNSITPPVYASEQKLNLNTKSFSVKLGATRVIYHAGTAGATLSVSNPQNYPILVQSSVKAADKSS
PAPFLVMPPLFRLEANQQSQLRIVRTGGDMPTDRETLQWVCVKAVPPENEPSDTQAKGATLDLNLSINVCDKLIFRPDAV
KGTPEDVAGNLRWVETGNKLKVENPTPFYMNLASVTVGGKPITGLEYIPPFADKTLNMPGSAHGDIEWRVITDFGGESHP
FHYVLK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
safB NP_454906.1 periplasmic fimbrial chaperone protein Not tested SPI-6 Protein 3e-113 98
afaB AAK16197.1 AfaB Virulence PAI-I AL862 Protein 5e-55 46
afaB ADD91742.1 putative AfaB-VIII periplasmic chaperone Not tested PAI-I AL862 Protein 5e-55 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_12505 YP_008381920.1 pili assembly chaperone protein SafB VFG0943 Protein 6e-52 52
I137_12505 YP_008381920.1 pili assembly chaperone protein SafB VFG0850 Protein 2e-55 50
I137_12505 YP_008381920.1 pili assembly chaperone protein SafB VFG0852 Protein 2e-53 49
I137_12505 YP_008381920.1 pili assembly chaperone protein SafB VFG0858 Protein 3e-52 49