Gene Information

Name : I137_08915 (I137_08915)
Accession : YP_008381252.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1918711 - 1919391 bp
Length : 681 bp
Strand : +
Note : response regulator in two-component regulatory system with BasS; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGAAGATTTTATTGATTGAAGATAACCAGAAAACCATTGAGTGGGTACGTCAGGGACTCACGGAAGCAGGCTATGTGGT
TGATTATGCCTGTGATGGACGAGACGGATTACACCTGGCCCTTCAGGAACATTATTCATTGATTATTCTTGATATTATGC
TGCCGGGGCTTGATGGATGGCAGGTTTTACGCGCGTTACGCACTGCGCATCAGTCCCCTGTTATTTGCCTGACGGCGCGC
GGCTCGGTTGAGGATCGCGTCAAAGGTCTTGAGGCGGGCGCTAATGATTACCTTGTTAAGCCTTTTTCCTTCGCCGAACT
GCTGGCCCGGGTGAGAGCTCAACTCAGACAGCATGTCCCTGTCTTTACCCGACTGACGATCAATGGTCTGGACATGGATG
CCACAAAGCAATCGGTGTCACGAAATGGCAAACCGATTTCCCTGACCCGCAAAGAATTCCTGCTCCTCTGGTTACTGGCG
TCCCGGGCAGGAGAAATCGTGCCCCGAACCGCGATCGCCAGCGAAGTTTGGGGAATTAACTTTGATAGTGAAACCAACAC
CGTTGATGTCGCGATTCGTCGGCTGCGCGCCAAAGTAGACGATCCATTTGAAAAGAAGCTCATTATGACCGTCCGGGGGA
TGGGTTATCGATTACAGGCGGAAACGTCGCAGAATGGTTAA

Protein sequence : 
MKILLIEDNQKTIEWVRQGLTEAGYVVDYACDGRDGLHLALQEHYSLIILDIMLPGLDGWQVLRALRTAHQSPVICLTAR
GSVEDRVKGLEAGANDYLVKPFSFAELLARVRAQLRQHVPVFTRLTINGLDMDATKQSVSRNGKPISLTRKEFLLLWLLA
SRAGEIVPRTAIASEVWGINFDSETNTVDVAIRRLRAKVDDPFEKKLIMTVRGMGYRLQAETSQNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 9e-103 99
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 7e-102 98

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_08915 YP_008381252.1 transcriptional regulator BAC0197 Protein 5e-59 58
I137_08915 YP_008381252.1 transcriptional regulator BAC0083 Protein 1e-55 57
I137_08915 YP_008381252.1 transcriptional regulator BAC0125 Protein 3e-59 56
I137_08915 YP_008381252.1 transcriptional regulator BAC0638 Protein 5e-52 56
I137_08915 YP_008381252.1 transcriptional regulator BAC0308 Protein 8e-54 55
I137_08915 YP_008381252.1 transcriptional regulator BAC0111 Protein 2e-57 54
I137_08915 YP_008381252.1 transcriptional regulator BAC0347 Protein 8e-51 53
I137_08915 YP_008381252.1 transcriptional regulator NC_007793.3914065.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator NC_002758.1121390.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator NC_010079.5776364.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator NC_002952.2859858.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator NC_007622.3794948.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator AE015929.1.gene1106. Protein 5e-34 45
I137_08915 YP_008381252.1 transcriptional regulator NC_003923.1003417.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator NC_013450.8614146.p0 Protein 7e-40 45
I137_08915 YP_008381252.1 transcriptional regulator NC_002951.3238224.p0 Protein 7e-40 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_08915 YP_008381252.1 transcriptional regulator VFG0596 Protein 3e-103 99
I137_08915 YP_008381252.1 transcriptional regulator VFG1389 Protein 3e-32 42
I137_08915 YP_008381252.1 transcriptional regulator VFG0473 Protein 3e-29 41