|
Name : I137_08650 (I137_08650) Accession : YP_008381200.1 Strain : Salmonella enterica S06004 Genome accession: NC_021984 Putative virulence/resistance : Virulence Product : type VI secretion protein Function : - COG functional category : - COG ID : - EC number : - Position : 1858484 - 1860289 bp Length : 1806 bp Strand : + Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+. DNA sequence : ATGGAATTCGAAGAACGCTATTACAGGCAGGAGTTGGATCACCTGCGGCAGTTGAGCAAGCTGCTGGCGACCGAAAAGCC GCATCTGGCCCGGTTTCTGGCAGAAAAAGAGGCCGATCCGGATATCGAGCGTCTGCTGGAGGGCGTGGCCTTTCTGACCG GCAATCTGCGCCAGAAAATCGAGGATGAGTTTCCGGAGCTGACGCACGGACTGATCCGGATGCTGTGGCCCAATTATCTG CGCCCGGTGCCGTCGATGACGCTGATTGAATATACGCCGGATATGGATAAAACTTCCGTGCCGGTACTGATCCCCCGTAA TGAGCAGTTCACAACCGGGGCGAAGGGGACTCAGGGAAACCCGGTATTGTCTGCGTATTCCGGCAATGAGCACGATGTAG CCCCGCCCTGTACGTTCACCCTGTGCCGGGATATCTGGCTGTTACCCGTTCAACTGGATCAGGTTGAAAATCGCAGTACG CCCCGCCACGGCATTATTGATATTACGTTTGCCGTCGCACCGGGCACTGATTTTGCCACGCTGGATCTGAACAGGCTGCG CTTCTGGCTGGGCAACGATGATAACTATACCCGCTATCAGCTTTATCTGTGGTTTTGTGAATATTTACAGGGCGCAGAGT TGATGGCGGGCGGGCAGTCGATCCCGATGCCTGAATTTATGCTGAAAGCGGTGGGTTTTGAGTCAGAGGACGCCATGCTG CCCTGGCCCGGCAATGTCCACAGCGGCTACCGCATTCTCCAGGAGTTTTTCTGCTACGCCGACAGTTTTCTGTTTTTCGA TGCCTGTGGCATTCCGGCATTGCCAGACAGGTTAAAGGAGAACCGTTTCACTCTGCGGCTGCGGTTTTCTCGCCCCTTAC CGGCAGATATCCGGCTGCGGGATGATTCCCTGCGCTTATATTGTGCGCCCGCCATTAATCTGTTTTCCCACCATGCCGAA GCCATCACGCTGGATCATCAGCGGCAGGATTACGCTCTGGTTCCCAGCCGTCATTTTCCGGATCATTACGACATTTTTTC GGTTAACAGCGTGGTGAGTCAGACGCAGGGGAAGCAGAGAAAAGCGGATCTTGGACGGCCGGTGATCACAGAGGCCGCGC GCCACTGGCCTGCTTTTGAGAGTTTCCGCCACCAGATGGAGTACAGCCGTAAGCGGGAAGTGGTCTACTGGCAGCACCGG ACCAGGACCTCGCTGTTTCACCGGGGCTTTGATCATACCCTGGCTTTTATTCATGCCGATGGCAGCCTCCCGGATGCCTC ACTGCTTAATAATGAAGTGGTTTCTGTATCGCTGACCTGCACCAACCGGGAGCTGCCGGTACAGCTACGGCCCGGCGATA TCACCGGTACGACAGGTAAAAACGCGTCGGTGGCGTCATTTCGCAATATCACCCGCCCCACCAGACCGCTCTGGCCGGTG ATTGACGGCAGCCTGCACTGGTCGTTGCTGTCTGCCATGAACCTGAATTATCTGTCGTTGCTGGATGCTGATGCGCTCAA ACAGGTGATCGCCAATTTTGATCGCCACGCCATCCATCATCCGCAGATGGCCCGTCTGTCACAGCAGAAGCTGGACGCCA TTGAACGGCTGGAAACAACCCCGGTTGATCGCCTGTTTACCGGCATACCGGTGCGCGGGCTGGCGTCCACCCTGTCCATT CATACGGAGCCGTTTGTCTGCGAGGGTGAAATGTACCTGCTGGGCGCGGTGCTGTCGCATTTTCTGTCGCTGTACGCCAT CGTCAATTCGTTCCACATGCTGACCGTCGTTAACACGGAAAGCTAG Protein sequence : MEFEERYYRQELDHLRQLSKLLATEKPHLARFLAEKEADPDIERLLEGVAFLTGNLRQKIEDEFPELTHGLIRMLWPNYL RPVPSMTLIEYTPDMDKTSVPVLIPRNEQFTTGAKGTQGNPVLSAYSGNEHDVAPPCTFTLCRDIWLLPVQLDQVENRST PRHGIIDITFAVAPGTDFATLDLNRLRFWLGNDDNYTRYQLYLWFCEYLQGAELMAGGQSIPMPEFMLKAVGFESEDAML PWPGNVHSGYRILQEFFCYADSFLFFDACGIPALPDRLKENRFTLRLRFSRPLPADIRLRDDSLRLYCAPAINLFSHHAE AITLDHQRQDYALVPSRHFPDHYDIFSVNSVVSQTQGKQRKADLGRPVITEAARHWPAFESFRHQMEYSRKREVVYWQHR TRTSLFHRGFDHTLAFIHADGSLPDASLLNNEVVSVSLTCTNRELPVQLRPGDITGTTGKNASVASFRNITRPTRPLWPV IDGSLHWSLLSAMNLNYLSLLDADALKQVIANFDRHAIHHPQMARLSQQKLDAIERLETTPVDRLFTGIPVRGLASTLSI HTEPFVCEGEMYLLGAVLSHFLSLYAIVNSFHMLTVVNTES |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1761 | YP_851424.1 | hypothetical protein | Not tested | PAI II APEC-O1 | Protein | 0.0 | 59 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| I137_08650 | YP_008381200.1 | type VI secretion protein | VFG2078 | Protein | 8e-119 | 43 |
