Gene Information

Name : I137_07690 (I137_07690)
Accession : YP_008381019.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : type III secretion protein SopE
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1681868 - 1682590 bp
Length : 723 bp
Strand : +
Note : Derived by automated computational analysis using gene prediction method: GeneMarkS+.

DNA sequence : 
GTGACAAAAATAACTTTATTTCCCCATAACTTTAGAATCCAAAAACAGGAAACCACACCACTAAAAGAAAAATCAACCGA
GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATCAAATTAAATTCAAAATTATCGGAACGTTTTA
TTTCGCATAAGAACACTGAATCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT
AAAGTCGTTAAAAACTTTATGCTTCAAACGCTCCATGATATAGATATTAGAGGTAGCGCGAGTAAAGACCCCGCATACGC
CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGTATAAAGATCAGTATTGTAACTTGCTCATCAGCAAAG
GAATCGACATAGCGCCTTTTCTTAAGGAAATTGGCGAGGCTGCGCAAAATGCAGGTCTGCCCGGAGCAACCAAGAATGAC
GTTTTTACGCCAAGCGGCGCAGGAGCCAATCCTTTTATAACTCCGTTGATTACATCAGCATACAGTAAGTATCCACATAT
GTTTACCAGTCAACATCAGAAGGCATCCTTTAACATCTATGCGGAGAAGATCATTATGACAGAAGTTGTACCGCTGTTTA
ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACAAATACTAGAAAACATTGCTAATAAATATATCCCAAACACTCCC
TGA

Protein sequence : 
MTKITLFPHNFRIQKQETTPLKEKSTEKNSLAKSILAVKNHFIKLNSKLSERFISHKNTESSATHFHRGSASEGRAVLTN
KVVKNFMLQTLHDIDIRGSASKDPAYASQTREAILSAVYSKYKDQYCNLLISKGIDIAPFLKEIGEAAQNAGLPGATKND
VFTPSGAGANPFITPLITSAYSKYPHMFTSQHQKASFNIYAEKIIMTEVVPLFNECAMPTPQQFQQILENIANKYIPNTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 6e-98 90
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 6e-98 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_07690 YP_008381019.1 type III secretion protein SopE VFG0467 Protein 6e-79 66