Gene Information

Name : I137_05610 (I137_05610)
Accession : YP_008380632.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1258290 - 1258877 bp
Length : 588 bp
Strand : +
Note : may be involved in the translocation of effector proteins into the host cell; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGGAAGCGAGTAACGTAGCACTGGTATTACCAGCGCCTTCCTTGTTAACACCTTCTTCCACTCCATCTCCCTCCGGGGA
GGGAATGGGTACTGAATCAATGCTTCTGTTATTTGATGATATCTGGATGAAGCTAATGGAGCTTGCCAAAAAGCTGCGCG
ATATCATGCGCAGCTATAACGTAGAAAAACAACGGCTGGCCTGGGAACTGCAAGTCAATGTTTTACAGACGCAAATGAAA
ACAATTGATGAAGCGTTTAGAGCATCAATGATTACTGCGGGTGGCGCAATGTTGTCGGGTGTACTGACGATAGGATTAGG
GGCCGTAGGCGGGGAAACCGGTCTTATAGCGGGTCAAGCCGTAGGCCACACAGCTGGGGGCGTCATGGGCCTGGGGGCTG
GTGTAGCGCAACGTCAAAGTGATCAAGATAAAGCGATTGCCGACCTGCAACAAAATGGGGCCCAATCTTATAATAAATCC
CTGACGGAAATTACGGAGAAAGCAACTGAAATTATGCAGCAAATCATCGGCGTGGGGTCGTCACTGGTCACGGTTCTTGC
TGAAATACTCCGGGCATTAACGAGGTAA

Protein sequence : 
MEASNVALVLPAPSLLTPSSTPSPSGEGMGTESMLLLFDDIWMKLMELAKKLRDIMRSYNVEKQRLAWELQVNVLQTQMK
TIDEAFRASMITAGGAMLSGVLTIGLGAVGGETGLIAGQAVGHTAGGVMGLGAGVAQRQSDQDKAIADLQQNGAQSYNKS
LTEITEKATEIMQQIIGVGSSLVTVLAEILRALTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseD NP_460366.1 translocation machinery component Virulence SPI-2 Protein 6e-65 99
sseD AAC28882.1 SseD Virulence SPI-2 Protein 5e-64 99
sseD CAA12188.1 SseD Virulence SPI-2 Protein 4e-65 99
sseD NP_805072.1 pathogenicity island effector protein Virulence SPI-2 Protein 7e-65 98
sseD NP_456127.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 7e-65 98
sseD YP_216409.1 secretion system effector protein SseD Virulence SPI-2 Protein 1e-62 97

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_05610 YP_008380632.1 pathogenicity island 2 effector protein SseD VFG0502 Protein 2e-65 99