Gene Information

Name : I137_05595 (I137_05595)
Accession : YP_008380629.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : pathogenicity island 2 effector protein SseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1255757 - 1256347 bp
Length : 591 bp
Strand : +
Note : necessary for the correct localization of SseC and SseD on the bacterial cell surface; Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence : 
ATGTCTTCAGGAAACATCTTATGGGGAAGTCAAAACCCTATTGTGTTTAAAAATAGCTTCGTCGTCAGCAACGCTGATAC
CGGGAGCCAGGATGACTTATCCCAGCAAAATCCGTTTGCCGAAGGGTATGGTGTTTTGCTTATTCTCCTTATGGCTATTC
AGGCTATCGCAAATAATAAATTTATTGAAGTCCAGAAGAACGCTGAACGTGCCAGAAATACCCAGGAAAAGTCAAATGAG
ATGGATGAGGTGATTGCTAAAGCAGCCAAAGGGGATGCTAAAACCAAAGAGGAGGTGCCTGAGGATGTAATTAAATACAT
GCGTGATAATGGTATTCTCATCGATGGTATGACCATTGATGATTATATGGTTAAATATGGCGATCATGGGAAGCTGGATA
AAGGTGGCCTACAGGCGATCAAAGCGGCTTTGGATAATGACGCCAACCGGAATACCGATCTTATGAGTCAGGGGCAGATA
ACAATTCAAAAAATGTCTCAGGAGCTTAACGCTGTCCTTACCCAACTGACAGGGCTTATCAGTAAGTGGGGGGAAATTTC
CAGTATGATAGCGCAGAAAACGTACTCATGA

Protein sequence : 
MSSGNILWGSQNPIVFKNSFVVSNADTGSQDDLSQQNPFAEGYGVLLILLMAIQAIANNKFIEVQKNAERARNTQEKSNE
MDEVIAKAAKGDAKTKEEVPEDVIKYMRDNGILIDGMTIDDYMVKYGDHGKLDKGGLQAIKAALDNDANRNTDLMSQGQI
TIQKMSQELNAVLTQLTGLISKWGEISSMIAQKTYS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseB NP_805069.1 pathogenicity island effector protein Virulence SPI-2 Protein 6e-78 99
sseB NP_460363.1 translocation machinery component Virulence SPI-2 Protein 6e-78 99
sseB AAC28879.1 putative secreted protein Virulence SPI-2 Protein 4e-78 99
sseB CAA12185.1 SseB Virulence SPI-2 Protein 4e-78 99
sseB NP_456130.1 putative pathogenicity island effector effector protein Virulence SPI-2 Protein 6e-78 99
sseB YP_216406.1 secretion system effector protein SseB Virulence SPI-2 Protein 2e-77 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_05595 YP_008380629.1 pathogenicity island 2 effector protein SseB VFG0499 Protein 2e-78 99