Gene Information

Name : I137_05520 (I137_05520)
Accession : YP_008380615.1
Strain : Salmonella enterica S06004
Genome accession: NC_021984
Putative virulence/resistance : Virulence
Product : regulatory protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1236670 - 1237896 bp
Length : 1227 bp
Strand : -
Note : Derived by automated computational analysis using gene prediction method: Protein Homology.

DNA sequence :
ATGTTTAAAGAAGAAAGACGTCATGCCATCATTAATTTACTGATAAAGGATAATAGTGTTAGCGTCAGTAAACTTTCAGA
CCTTTATAAGGTTAGCCAGGAGACTATTCGTTCCGATCTACGCTATTTCCAGAAATCAGGTATGCTTCAGCGTTGCTATG
GCGGAGGGATTTTAAACCGTGACGCGCTGAGTAAGCTTATCACTGAAAATAAGATTGATATCTCCAGCACTATCGCCACG
CCAATCCATCAGGATGCAAAACTGCGCCGGGAAAACCCAAAAAAAGCAGGCAAGGTGTGTGTTTTAGGCTCATTCAATAT
TGATGTTTCAGCAACCGTGCCGTGGTTTCCACAAAGCGGAGAATCCATTCTGGCCAGTCAATTTGGATTCTATCCTGGCG
GTAAAGGAGCCAACCAGGCTTTAGCGGCGAACAATGCCGGCGCTGCGGCACATTTTATTTTTAAAGTGGGCAAAGATCAG
TTCAGCGCATTTGCTATGAATCATATTATTCAATCAGGTATCGCCTCATACAGCGCGTATCAAACAGATAAAGCGCCCAC
CGGTAGCGCATTGATCTATGTCTCCGCCGTGGATGGCGATAATATTATCGCCATCTACCCTGGCGCCAATATGATGCTCA
CCACGCAAGAGATTAACGAGCAACACCGTTATATCGCCGAGTCTGACGTTATGTTAATGCAGCTCGAAACGAACATTGAA
GCGTTGACTGAATTTATTCGTCTGGGCAAACAAGAAAATAAAATGATCATGCTGAATCCTGCCCCCTATAAGAAACAGGT
AACGCATTTATTATCTGATATTGACATCATCACGCCGAATGAAACTGAAGCCTCTTTTTTATCCGGCGTAACCATTACTG
ATATTAATGATGCGAAAAAAGCCGGAAATATTATTCTGCAATCCGGGGTGAAAAAAGTCATCATTACCCTTGGCGCCCGT
GGATCTCTGCTCTGTGAGCACGCCCGCACGTTGTATATTCCTGCGTGGAGCGCCGTGGTAAAAGATGCCGCCGGGGCCGG
TGACGCTTTTAATGGCGCCTTAGCCGCCGCGCTGGCGCGACAAGCAGACATGGTCGCAGCCATTCAATATGCCTCCGCTT
TCGCTTCTCTGGCGGTGGAACAAGTCGGTGCGTCGAGTATGCCTCAGCACTTGCAGGTTTTACATCGAATGCGTACCCAA
TCTAATAAAGTCATTCACATTAATTAA

Protein sequence :
MFKEERRHAIINLLIKDNSVSVSKLSDLYKVSQETIRSDLRYFQKSGMLQRCYGGGILNRDALSKLITENKIDISSTIAT
PIHQDAKLRRENPKKAGKVCVLGSFNIDVSATVPWFPQSGESILASQFGFYPGGKGANQALAANNAGAAAHFIFKVGKDQ
FSAFAMNHIIQSGIASYSAYQTDKAPTGSALIYVSAVDGDNIIAIYPGANMMLTTQEINEQHRYIAESDVMLMQLETNIE
ALTEFIRLGKQENKMIMLNPAPYKKQVTHLLSDIDIITPNETEASFLSGVTITDINDAKKAGNIILQSGVKKVIITLGAR
GSLLCEHARTLYIPAWSAVVKDAAGAGDAFNGALAAALARQADMVAAIQYASAFASLAVEQVGASSMPQHLQVLHRMRTQ
SNKVIHIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rbsk YP_216390.1 DeoR family transcriptional regulator Not tested SPI-2 Protein 9e-164 99
orf408 NP_460347.1 regulatory protein Not tested SPI-2 Protein 7e-164 99
ORF 408 CAB37417.1 - Not tested SPI-2 Protein 5e-164 99
APECO1_1076 YP_853096.1 carbohydrate kinase Not tested PAI IV APEC-O1 Protein 5e-56 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
I137_05520 YP_008380615.1 regulatory protein VFG0483 Protein 3e-164 99