Gene Information

Name : HTIA_0928 (HTIA_0928)
Accession : YP_008376378.1
Strain : Halorhabdus tiamatea SARL4B
Genome accession: NC_021921
Putative virulence/resistance : Unknown
Product : oligo-1,6-glucosidase, family GH13
Function : -
COG functional category : -
COG ID : -
EC number : 3.2.1.10
Position : 902896 - 904656 bp
Length : 1761 bp
Strand : -
Note : -

DNA sequence :
GTGGCCGTCCTGCGTTGTCTCACGGGAACACCGATGAGTCAGCGCCACTCTCCCCCCTCGAACGTACTCGCGACGGAAAC
GGACGGTACTCCCTGGTGGAAAGAGGCGGTCGTCTACCAGATCTACCCGAAGAGTTTCAACGACACCGACGCCGACGGGA
TCGGTGACATCCCCGGCATCGTCGAGAAGGTCGACTACCTCGACGAACTGGGCGTCGACGCCGTCTGGCTGTCGCCCGTC
TATCAGTCCCCCCAGGCCGACAACGGCTACGACATCAGCGACTACCGCGCCATCGACGACCAGTACGGCGACCTCGAGGA
CTGGGGGCAGTTGCTGGCAGAACTCCACGACCGTGACATCCGTCTCATCATGGACCTGGTCGTCAACCACACCTCGGACG
AACACGAGTGGTTCAAGCGCTCCCGGCGCGGCGAGGAACCCTACGACGACTATTACTACTGGCGTGAGGGCGACCCCGAA
ACCCCGCCGAACAACTGGGACTCCTTCTTCGGCGGGTCGGCGTGGTCCTACGACGACGAGCGCGAAGCGTGGTATCTCCA
CCTCTTCGACGAGAAACAGCCCGATCTCAACTGGCGTAACCCTGCCGTCCGCGAGGACGTCTACGACATGATGAACTGGT
GGCTCGACCGCGGGATCGACGGCTTCCGGATGGACGTCATCAACCTCATCTCCAAGACAGAGGGACTTCCCGACGGCGAC
CCCCACGGCGGCCTGGTCGGGGCCGAGCACTTCATGAACGGTCCGCGAGTCCACGAGTACTTCTCGGAGATGATTGGGCA
GACCATCGATACTGTCGATCGTGAGATCATGACCGTCGGCGAGACGCCGGGTGTCTCCGTCGAAGACGCCCGAGAGTACG
TCGGCGAGGACGGCGACGGCCTCTCGATGGTGTTCCAGTTCGAGCACATGGGCGTCGGCGACGGCGACAGCAAGTGGGAC
GCCGGTGAGTTCGACCTCGTCGAGTTCAAGCAGATCTTCGAGCGGTGGCAGACCGGGCTCGCCGCGGACGGCTGGAACAG
CGTCTACCTCTCGAATCACGATCAGCCACGGTCGGTCTCGCAGTTCGGCAACGACGGCGAGTACCGACAGGAGTCGGCGA
AGCTTCTGGGGACGTTCACTCACACGCTTCACGGCACGCCGTTCGTCTATCAGGGCGAGGAACTCGGGATGACGAACGCG
AGTTTCGAGTCGATCGACGAGCTACGCGACGTCGAGGCGATCAACTTCGTCGAGGAGGCCATCCAGGACGGCGATGCTGA
GGACTATGACGACGTCCGCGACGCGATCGAAGCCGTCGCACGCGACAACGCCCGGACGCCGATGCAGTGGTCGGCCGACG
CGAACGCCGGGTTCACCGACGGCGAGCCCTGGCTGAAAGTCACCGACAACTACGCCGATATCAACGTCGCCAGCGAACGT
GAAAGTCGGGACTCGATCTTCCAGTATTACCGGCGGCTGATCGACCTTAGACACGACAACGACGTCCTGATCTACGGTGA
CTTCGAATTGCATTACCCGGATCACGAGTCAGTGTTCGCCTACACGCGGACCCTCGGCGAGGACCGTGCGCTGATCGTCC
TCAACTGGAGCGACGAGCCGACAACGGTCGACATCCCCGATGACATCCCGACTGACGACCTCGAACTCGCCATCGCGAAC
CAGGACGTCTCGACCGGCGTGAACGCACAGTTCGAACTCCAACCCTGGGACGCCCGCGTTTACCTCACTGAAAGCCAATG
A

Protein sequence :
MAVLRCLTGTPMSQRHSPPSNVLATETDGTPWWKEAVVYQIYPKSFNDTDADGIGDIPGIVEKVDYLDELGVDAVWLSPV
YQSPQADNGYDISDYRAIDDQYGDLEDWGQLLAELHDRDIRLIMDLVVNHTSDEHEWFKRSRRGEEPYDDYYYWREGDPE
TPPNNWDSFFGGSAWSYDDEREAWYLHLFDEKQPDLNWRNPAVREDVYDMMNWWLDRGIDGFRMDVINLISKTEGLPDGD
PHGGLVGAEHFMNGPRVHEYFSEMIGQTIDTVDREIMTVGETPGVSVEDAREYVGEDGDGLSMVFQFEHMGVGDGDSKWD
AGEFDLVEFKQIFERWQTGLAADGWNSVYLSNHDQPRSVSQFGNDGEYRQESAKLLGTFTHTLHGTPFVYQGEELGMTNA
SFESIDELRDVEAINFVEEAIQDGDAEDYDDVRDAIEAVARDNARTPMQWSADANAGFTDGEPWLKVTDNYADINVASER
ESRDSIFQYYRRLIDLRHDNDVLIYGDFELHYPDHESVFAYTRTLGEDRALIVLNWSDEPTTVDIPDDIPTDDLELAIAN
QDVSTGVNAQFELQPWDARVYLTESQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 2e-120 49