Gene Information

Name : HTIA_2310 (HTIA_2310)
Accession : YP_008377729.1
Strain : Halorhabdus tiamatea SARL4B
Genome accession: NC_021921
Putative virulence/resistance : Virulence
Product : ferrichrome ABC transporter, ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2320381 - 2321289 bp
Length : 909 bp
Strand : +
Note : -

DNA sequence : 
ATGAGCGACACACCGCAGACGGACGGCGGAAGCCAGACGGTACAGCTTCCTTCGGGAACTCCCGGCGAGAGTGCCGACGT
CACCGAGGACGGCAACAGTCACGGCGAGCCATCGCCGGATGCCAGCGAATTCGTCGGCGAGGACGTCGTTGTCGGGTATC
CTGGCAGCGAGGAGCCGGTGATCGACGGCGTGACGATTCGCCTTCCGCCGGGGGAAGTGACGGCATTGATCGGCCCGAAC
GGCAGCGGCAAGAGCACGCTGTTGAAGGGGCTCGCCGACCAGCTCGCCATCGACGCGGGCACGGTCCTGCTGGATGGAGA
AGACGTCCACACGCTCGAGACGAGAGAACTCGCCCGCAAGCTCGGGTTGCTCTCCCAGGAGAACGTCGCGCCAAACAGCC
TCACCGTCGAGGACCTGGTCAGTCACGGTCGGTATCCCCACCGTGGCTTTTTCGACTCGCTGTCGGACGCCGACCGTGAG
GCGATCGACGAGGCGATCGAACTGGCCGGCGTCGATCACCTGCGCGACCGTTCGGTCGGGAGCCTCAGTGGCGGCCAGCG
CCAACTGGTCTGGATCGCGATGGTGCTCGCCCAGGATACGGATGTCCTCTTGCTCGACGAACCGACGACGTTTCTCGATA
TGCACCATCAACTCGAAGTCATGGAGATCGTCGAACGCCTCCGGGACGAGAGCGACGTGACGGTCGGACTCGTCTTACAC
GACATCGAGCAGGCCGCCCGGTACGCCGATCACGTGGTCGCGTTAAAAGACGGGACTGTCCGGGCCAGCGGAGATCCCGA
GGCGGTGCTGACCGAGTCACTCCTCAGGGACGTCTTCGCGGTCGACGCGTCCGTGGCGACGACCGACCGAGGGCTCCAGA
TTACGCCAGTACGCCCGTATCACGGATGA

Protein sequence : 
MSDTPQTDGGSQTVQLPSGTPGESADVTEDGNSHGEPSPDASEFVGEDVVVGYPGSEEPVIDGVTIRLPPGEVTALIGPN
GSGKSTLLKGLADQLAIDAGTVLLDGEDVHTLETRELARKLGLLSQENVAPNSLTVEDLVSHGRYPHRGFFDSLSDADRE
AIDEAIELAGVDHLRDRSVGSLSGGQRQLVWIAMVLAQDTDVLLLDEPTTFLDMHHQLEVMEIVERLRDESDVTVGLVLH
DIEQAARYADHVVALKDGTVRASGDPEAVLTESLLRDVFAVDASVATTDRGLQITPVRPYHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-54 46
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 6e-50 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 2e-51 45
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 43
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 43
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 43
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 5e-53 43
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-51 42
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 6e-51 42
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 6e-51 42
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 6e-51 42
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-36 42
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-50 41
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HTIA_2310 YP_008377729.1 ferrichrome ABC transporter, ATP-binding protein BAC0164 Protein 1e-51 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
HTIA_2310 YP_008377729.1 ferrichrome ABC transporter, ATP-binding protein VFG1042 Protein 9e-52 45
HTIA_2310 YP_008377729.1 ferrichrome ABC transporter, ATP-binding protein VFG0925 Protein 7e-54 44