Gene Information

Name : CYCME_0921 (CYCME_0921)
Accession : YP_008373613.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : Flagellar biosynthesis pathway, component FliP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 910744 - 911475 bp
Length : 732 bp
Strand : +
Note : -

DNA sequence :
ATGAAAAGGCCACTATTGTTTATTATTTTTTTCTCTCTTGTTCCCATGACTAGTTTTGCGGCGAATGGCATTGAGGCCAT
TACTATCGCTGGAGACGGTAAAAGTTATTCGGTCACGCTGCAAATATTAGCAGTTATGACATTGCTGACAGTTTTACCAA
GCTTGTTAGTAATGATGACCTCGTTTACACGAATCATTATTGTTTTTTCCATTCTTCGCCAAGCGATGGGCACACCACAA
ACACCTAGCAATCAAATTTTGTTGGGGCTGGCTTTATTTTTAACTTTTTTCATTATGTCGCCAGTGTTAGAAAAGGCGAA
TGAAGAGGCTCTGCAACCTTATTTAAACGATCAGATAGCGGCAGATATAGCTATTACAAAAGCAATAGAGCCGTTTCGTG
GCTTTATGTTGCGCCAGACCAGAAGTGATGATTTGGAAATGTTTGCCAGAATTTCTGGAGCGGAGCCTATCACAGATGAG
TCAGATGTGCCGTTATCGCTGTTATTACCGGCGTTTGTGACCAGTGAGCTAAAAACAGCGTTTCAAATTGGGTTTATGAT
CTTTGTTCCTTTTCTTATCATCGATATGGTCGTGGCCAGTGTCTTGATGTCGATGGGTATGATGATGTTATCTCCATTGA
TTATTTCCTTGCCATTTAAGCTGATGTTATTTGTTTTAGTAGATGGCTGGTCGCTGATTATGGAGACTTTAGCCGCGAGC
TTCTTTACTTAG

Protein sequence :
MKRPLLFIIFFSLVPMTSFAANGIEAITIAGDGKSYSVTLQILAVMTLLTVLPSLLVMMTSFTRIIIVFSILRQAMGTPQ
TPSNQILLGLALFLTFFIMSPVLEKANEEALQPYLNDQIAADIAITKAIEPFRGFMLRQTRSDDLEMFARISGAEPITDE
SDVPLSLLLPAFVTSELKTAFQIGFMIFVPFLIIDMVVASVLMSMGMMMLSPLIISLPFKLMLFVLVDGWSLIMETLAAS
FFT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YPO0270 YP_002345352.1 type III secretion system protein Virulence Not named Protein 1e-26 42
hrcR ABA47279.1 HrcR Virulence S-PAI Protein 3e-23 42
escR ACU09473.1 type III secretion system protein EscR Virulence LEE Protein 2e-25 41
escR YP_003236103.1 T3SS structure protein EscR Virulence LEE Protein 3e-25 41
escR NP_290283.1 type III secretion system protein Virulence LEE Protein 3e-25 41
escR AAC31528.1 L0049 Virulence LEE Protein 2e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_0921 YP_008373613.1 Flagellar biosynthesis pathway, component FliP VFG1259 Protein 2e-59 65
CYCME_0921 YP_008373613.1 Flagellar biosynthesis pathway, component FliP VFG2016 Protein 6e-56 64
CYCME_0921 YP_008373613.1 Flagellar biosynthesis pathway, component FliP VFG2494 Protein 3e-56 61
CYCME_0921 YP_008373613.1 Flagellar biosynthesis pathway, component FliP VFG2338 Protein 3e-55 59
CYCME_0921 YP_008373613.1 Flagellar biosynthesis pathway, component FliP VFG0394 Protein 2e-23 41
CYCME_0921 YP_008373613.1 Flagellar biosynthesis pathway, component FliP VFG0827 Protein 1e-25 41