Gene Information

Name : CYCME_0462 (CYCME_0462)
Accession : YP_008373162.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : Sugar transferases involved in lipopolysaccharide synthesis
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 460139 - 460699 bp
Length : 561 bp
Strand : +
Note : -

DNA sequence : 
ATGAAAAGACTGTTTGACCTGTTTTTGGCTATTAATGCCGCTGCTGTTCTTTTAGTGCCTATTTGTATTGTGGCAATTTT
GGTTAGAGTAACGTCGAAAGGCCCAGCGTTATATTGGTCTGATCGAGTAGGTATTAACAATACTATTTTCAAAATGCCTA
AATTCCGTAGCATGAAAACAGATACGCCCGCCGTTGCCACTCATTTATTAAAAGACCCGAAAAGTGTACTGACGCCCATT
GGCGATTTATTGCGTAAAACAAGTTTAGATGAGCTGCCGCAACTATGGTGTATTTTAAAGGGTGATATGAGTTTTGTTGG
CCCCCGGCCTGCGTTGTTTAACCAAGATGATTTAATTGCTTTGCGTACAGAAAAAGGTGTTCATCAGTTAGTGGCAGGCT
TAACCGGTTGGGCACAAGTAAATGGTCGTGATGAATTGCCTATATCGCAAAAAGTAGAGTTGGATGTTGAGTACATGCAT
CGACGCTCTTTTTTATTCGATATTTATATCCTTTGGTTAACGTTTCTCAAAGTGCTTAAAAGGGACGGTGTTTCCCACTA
A

Protein sequence : 
MKRLFDLFLAINAAAVLLVPICIVAILVRVTSKGPALYWSDRVGINNTIFKMPKFRSMKTDTPAVATHLLKDPKSVLTPI
GDLLRKTSLDELPQLWCILKGDMSFVGPRPALFNQDDLIALRTEKGVHQLVAGLTGWAQVNGRDELPISQKVELDVEYMH
RRSFLFDIYILWLTFLKVLKRDGVSH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cap1N AAL26667.1 type 8 capsule synthesis gene Virulence SCCcap1 Protein 5e-38 50
SSP0070 YP_300160.1 capsular polysaccharide synthesis protein Not tested SCC15305cap Protein 9e-37 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_0462 YP_008373162.1 Sugar transferases involved in lipopolysaccharide synthesis VFG1369 Protein 4e-26 50
CYCME_0462 YP_008373162.1 Sugar transferases involved in lipopolysaccharide synthesis VFG1309 Protein 2e-36 49