Gene Information

Name : CYCME_0026 (CYCME_0026)
Accession : YP_008372729.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : Glutamine synthetase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 25940 - 27349 bp
Length : 1410 bp
Strand : +
Note : -

DNA sequence :
ATGTCAGCACAAGATGTATTAGATTTGATCAAAGAAAAAGAAGTCGCTTTTGTTGATTTCCGTTTCGTTGATACTATTGG
TAAAGAACAACACGTAACAGTTCCATCACATACGGTAGATGCTGATGTGTTTGAGGACGGCAAAATGTTTGATGGATCTT
CCATTCTAGGTTGGAAGGGTATTAATGAGTCAGACATGATTTTGATGCCAGATCCATCAACAGCTGTTTTAGACCCATTT
TTTGATGACGTAACGCTGATTATCCGTTGTGATGTTGTTGAGCCTAGCGATATGTCTGGCTATGAAAGAGACCCTCGCTC
AATTGCTAAAAGAGCAGAAGAGTATCTTCAGTCAACAGGTATTGGTGACGCGGCTTATTTTGGTCCAGAAAATGAGTTTT
TTGTATTTGATGATATTCGTTGGAAAACAGACATGTCGGGGTCTTTTTATAAAATAGACTCTGAAGAAGCGGGCTGGAAT
TCAGAAAAAGATTATGAAAGTGGCAACATGGGTCACCGTCCTGGTACAAAAGGCGGTTATTTCCCAGTCCCTCCTGTTGA
TTCTCTTCATGACATGCGTGCGGCTATGTGTTTAACGCTTGAAGAAATGGGTCAAGAGACTGAAGTTCATCACCATGAAG
TAGCAACAGCGGGCCAGTGTGAAATTGGCACAGTGTTCAATACATTGGTGAAGAAAGCAGATGAGGTCTTAGAGCTTAAA
TATGTAGTTCAAAACGTTGCTCACGCCTATGGCAAAACAGCTACTTTTATGCCGAAGCCAATCGTTGGTGATAACGGTAA
TGGTATGCATGTTCACCAATCAATTTTTAAAGACGGCAAAGCATTATTTTCTGGTGATTTATATGGCGGTTTATCTGAAA
TAGCCTTGTTTTATATTGGCGGTATTATTAAACATGCTAAGGCAATTAACGCCTTCGCAAATGCTTCAACAAACAGCTAC
AAACGTTTAGTACCGGGTTTTGAAGCACCTGTTATGTTGGCTTATTCTGCACGTAACCGTTCAGCATCTATTCGAATTCC
TTTTGTAGCAAACCCTAAAGGTCGTCGAATTGAAGTGCGTTTTGCTGATTCAACGGCAAACCCATACTTATGTTTCTCAG
CCATGTTAATGGCGGGTCTTGATGGTATTAAGAATAAGATCCACCCTGGCGAAGCTATGGATAAAGACCTTTATGATTTG
CCACCAGAAGAAGAAGCTGCAATTCCACAAGTAGCGACTTCATTTGATGAAGCACTAGTTGCATTGGATAAAGACCGTGC
ATTCTTAACTGAGGGCGGTGTGTTTACTGATGATATGATTGATGGCTACATTAAATTAAAAATGGAAGAAGTGACTCGCC
TAAGGATGAGCACTCACCCGATTGAGTTTGATATGTACTACAGCTTGTAA

Protein sequence :
MSAQDVLDLIKEKEVAFVDFRFVDTIGKEQHVTVPSHTVDADVFEDGKMFDGSSILGWKGINESDMILMPDPSTAVLDPF
FDDVTLIIRCDVVEPSDMSGYERDPRSIAKRAEEYLQSTGIGDAAYFGPENEFFVFDDIRWKTDMSGSFYKIDSEEAGWN
SEKDYESGNMGHRPGTKGGYFPVPPVDSLHDMRAAMCLTLEEMGQETEVHHHEVATAGQCEIGTVFNTLVKKADEVLELK
YVVQNVAHAYGKTATFMPKPIVGDNGNGMHVHQSIFKDGKALFSGDLYGGLSEIALFYIGGIIKHAKAINAFANASTNSY
KRLVPGFEAPVMLAYSARNRSASIRIPFVANPKGRRIEVRFADSTANPYLCFSAMLMAGLDGIKNKIHPGEAMDKDLYDL
PPEEEAAIPQVATSFDEALVALDKDRAFLTEGGVFTDDMIDGYIKLKMEEVTRLRMSTHPIEFDMYYSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
glnA YP_003728749.1 glutamine synthetase Not tested cag PAI Protein 2e-107 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_0026 YP_008372729.1 Glutamine synthetase VFG1399 Protein 1e-107 51