Gene Information

Name : CYCME_2465 (CYCME_2465)
Accession : YP_008375129.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : Type I restriction-modification system methyltransferase subunit
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2503483 - 2505906 bp
Length : 2424 bp
Strand : -
Note : -

DNA sequence :
ATGGATCATTCTGTACACAATAAACTCGTATCTTTCATTTGGAATATCGCGGACGACTGTCTTCGCGATGTTTATGTGCG
TGGTAAATACCGTGATGTAATTTTGCCTATGGTGGTACTTCGTCGCTTGGATACATTGCTTGAGCCAAGCAAACAGGCCG
TATTGGACGAAGTTAAGTTTCAGAAAGAAGATATGAATGCCACAGAACTTGATGATGAGCCGCTCAAGGCGGCATCAGGT
CAGGTGTTTTACAATGTTTCTAAATGGACGTTAAAAAGCCTATTCAGCACAGCGACTAACAATCAGCAAATCTTGCTAGC
TAACTTTGAGGAATACCTCAATGGCTTCAGTGATAACGTAAAAGAGATTATTGAGCGTTTTGAGCTGCTATCAAAAATTC
GCCATATGGCAGGTAAAGATGTGCTGCTTGATGTGCTTGAGAAATTTGTTTCGCCGCATATCAACCTCACTCCTAACCAA
GTAGAAGATCCAGACGGTAACAAGTTACCAGCCCTAACAAATTTGGGTATGGGTTATGTATTTGAAGAGCTTATTCGTAA
ATTCAACGAAGAAAATAACGAAGAAGCTGGTGAGCACTTTACGCCGCGTGAAGTAATCGAGTTAATGACGCATCTTGTTT
TTGATCCTATCAAAGATGATTTACCGCTAACAATGTCTGTTTATGACCCTGCTTGCGGTAGCGGTGGGATGTTGACTGAA
TCTCAGAACTTCATTGAAGAGAAGTATCCAGCCAGCGCTTCATCTCAAGTGCAGCGTGATATTTACCTGTACGGTAAAGA
AATCAACGATGAGACCTACGCTATCTGTAAGTCGGACATGATGATCAAGGGTAATAACCCTGAAAACATCAAAGTAGGCT
CAACGCTCTCAACGGATGAATTTGCGTCTGACCGATTTGACTTCATGTTGTCAAACCCGCCATACGGAAAAAGCTGGGCT
TCAGAGCAAAAGAATATCAAAGACGGCGGCGAAGTTATTGATCCGCGATTCAAGGTCGAACTAACGGACTATTGGGGCAA
TAAAGAAACCGCTGATGCAACACCGCGTTCTAGTGATGGGCAGCTTCTGTTTCTTATGGAGATGGTGAGCAAGATGAAAT
CACCATCCACAAGTCCAATGGGGACGCGAATAGCTTCAGTTCATAACGGCTCTAGCTTGTTTACAGGTGATGCTGGTGGT
GGTGAAAGTAATATCCGCCGCTTTATCATCGAAAACGATATGCTCGATGCCATTGTGCAGCTACCTAATAACCTGTTTTA
CAACACAGGTATTACAACCTATATCTGGCTATTGAATAACAACAAGCCAGAAGCGCGTAGAGGCAAAATTCAGCTTATTG
ATGCTAGTTTGCTATTCCGAAAGCTACGCAAAAACCTAGGCAATAAGAACTGTGAATTTGCGCCAGAACATATTGCTGAA
ATTACACAAGCTTACCTTGATTGTGCTGATATAGAACGGACATTAGATGCTAATAACGATGCTGTTGGCATAGCCAGCCA
AGTATTTAAGAACGAAGATTTCGGTTATCACAAAGTCAATATCGAACGCCCTGATCGCAGAAAAGCCAAGTTCACACCAG
AAGCCATTGCGCCGCTACGCTTTGATAAGTCATTGTTAGAAGTGATGGAGCACTTGTTTGAAGAGCATGACGATAAAGTC
TACGACCAAGGCTTTTTAAAAGGCATAAGCAAAGACATTTTAGAATGGTGCGAAGACAACGATATTAGTGTTAACGCCAA
AGCCAAATCAAAACTACTGGATGAGAAATACTGGCAGAAGCTGCGTGCTATTCTTGAAGCCGCTAATCTGCTCATGCAAG
AAATTGGCAGTGATGAATTTAAAGACTTTAATCTATTTAAAGTCAAAGTTGATGCTGTACTCAAAGAACAAAAAATCAAG
CTGTCTGCACCAGAGAAAAATGCGATATTAAATGCTGTTAGTTGGTATGACGAGCATGCAGAAAAGGTCGTTAAGAAAGT
CGTGAAGCTTTCAGACACCAAGTTGGAAGAGCTGTTAAACCATTTAGGATGTTCTCAAAATCAATTAGCAGACTTTGGTT
ATTACTCTACAAGCGCCTGCGGCGACGATAAAAATAGTGCAGGCGAATATATTATTTACGAGCCAAATTCAGATCTACGC
GACTCAGAATCTGTTCCCCTCGCTCAAGAAATTCATGACTATTTCTTAGAAGAAGTGAAGCCGCATGTTGAAGAAGCGTG
GATCAATTTAGATAGTACTAAGATTGGTTACGAGATCAGCTTTAATAAATACTTTTATCGCCATAAACCACTTCGAGAAC
TGAGTGAAGTGGCAAACGATATTATTGACTTAGAGCAGAAAGCCGAAGGCTTAATTGCGCAAATACTGGGTGTAGATGTT
GCTGAAATTCAAGGAGAAGCATGA

Protein sequence :
MDHSVHNKLVSFIWNIADDCLRDVYVRGKYRDVILPMVVLRRLDTLLEPSKQAVLDEVKFQKEDMNATELDDEPLKAASG
QVFYNVSKWTLKSLFSTATNNQQILLANFEEYLNGFSDNVKEIIERFELLSKIRHMAGKDVLLDVLEKFVSPHINLTPNQ
VEDPDGNKLPALTNLGMGYVFEELIRKFNEENNEEAGEHFTPREVIELMTHLVFDPIKDDLPLTMSVYDPACGSGGMLTE
SQNFIEEKYPASASSQVQRDIYLYGKEINDETYAICKSDMMIKGNNPENIKVGSTLSTDEFASDRFDFMLSNPPYGKSWA
SEQKNIKDGGEVIDPRFKVELTDYWGNKETADATPRSSDGQLLFLMEMVSKMKSPSTSPMGTRIASVHNGSSLFTGDAGG
GESNIRRFIIENDMLDAIVQLPNNLFYNTGITTYIWLLNNNKPEARRGKIQLIDASLLFRKLRKNLGNKNCEFAPEHIAE
ITQAYLDCADIERTLDANNDAVGIASQVFKNEDFGYHKVNIERPDRRKAKFTPEAIAPLRFDKSLLEVMEHLFEEHDDKV
YDQGFLKGISKDILEWCEDNDISVNAKAKSKLLDEKYWQKLRAILEAANLLMQEIGSDEFKDFNLFKVKVDAVLKEQKIK
LSAPEKNAILNAVSWYDEHAEKVVKKVVKLSDTKLEELLNHLGCSQNQLADFGYYSTSACGDDKNSAGEYIIYEPNSDLR
DSESVPLAQEIHDYFLEEVKPHVEEAWINLDSTKIGYEISFNKYFYRHKPLRELSEVANDIIDLEQKAEGLIAQILGVDV
AEIQGEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC1769 NP_231404.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 76
VC0395_A1367 YP_001217310.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 76
VPI2_0017c ACA01834.1 DNA methylase HsdM Not tested VPI-2 Protein 0.0 76

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_2465 YP_008375129.1 Type I restriction-modification system methyltransferase subunit VFG1102 Protein 0.0 76