Gene Information

Name : CYCME_2373 (CYCME_2373)
Accession : YP_008375042.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2404180 - 2405550 bp
Length : 1371 bp
Strand : +
Note : -

DNA sequence :
ATGACTCAAGCGCTTGCCCTTATTGTTGACGACGAACCTGACATTCTCGAGTTACTTGATATCACCCTGTCTCGCATGAA
TATTTCGAGCAAACCCGCGCAAGACTTAGCCGAAGCAAAAAGATTACTAAAAACACACCACTTTGACATTTGCTTAACCG
ATCTTCAGCTGCCTGACGGAAATGGCCTTGAGCTTGTTAAGCATATTCAAAAAAACACTCCCAATCTACCCATTGCCGTT
ATTACCGCTTTTGGTAGTATGGACACTGCAGTCAAAGCACTAAAGCTTGGCGCTTTTGATTTCGTTTCCAAGCCTGTCGA
CCTGAAAAGCTTAAAAAGCCTCGTTAGCTCCGCTATTAAAATTAACGACACCACAGAACCCGTTGATAGGCGTAGTCGTG
ACCAACTATTAGGCGACTCCGTTATGATGGCAAACGTACGCGCAAAAATTGCCAAACTGGCTCGCAGCCAAGCACCGATC
TACATCAGCGGCGAGTCTGGAACCGGTAAAGAGTTGGTCGCCAAGCTAATTCATGAAAAAGGCCCACGATCGCATCAACC
TTTTGTGCCAATAAACTGTGGCGCTATTCCGCAGGAACTCATGGAGAGTGAGTTTTTTGGTCACAAAAAAGGCAGTTTCA
CCGGTGCCATTGCCGACAAACCCGGTCTTTTTCAAACGGCCAGTGGCGGCACCTTATTTTTAGATGAAGTTGCCGATTTA
CCACTGCATATGCAAGTCAAATTATTACGTGCAATTCAAGAAAAAAGCATTCGCCCCATTGGCAGCGATACAGAACAACC
CATTGACGTAAGAATATTAAGCGCCACCCATAAAAACCTTCCTGAGTTAGTTGAGCAAGGCAATTTTCGGCAAGACTTAT
ATTATAGAATTAATGTTATCGAACTACCGCTACCTCCTCTACGCGAGCGTGCAGAAGATATTACACAGCTGGCCAAGCAC
ATTTTACAAAAACTAAACGCCGAGAATAATAGCCCAACCAAGCTCACCGACACTGCGTTAAAAGCACTCGCTCAATACAC
TTTCCCCGGTAATGTGCGCGAATTAGAAAATATACTGGAACGCGCCTTCACTCTTTGTGAAAACGGTATTATTCATCAAA
CAGACTTACAACTGCCCAATAATACTAAAGACGCCGCCGCGCAGACTAGCGGTATTAAAAACCCAACACAAAAAACAAGC
CTCCCAACTCAAGAAGCACCGCTAGAAGACTATCTTGACAGCTTAGAGAAAGAAGCCATTACCAATGCCTTAGAAAAAAC
ACGCTGGAATAAAACAGCCGCCGCCAAAGAACTTGGCATCAGCTTTCGTGCGTTGCGTTATCGCTTAAAAAAATTAGGCC
TGAACGATTGA

Protein sequence :
MTQALALIVDDEPDILELLDITLSRMNISSKPAQDLAEAKRLLKTHHFDICLTDLQLPDGNGLELVKHIQKNTPNLPIAV
ITAFGSMDTAVKALKLGAFDFVSKPVDLKSLKSLVSSAIKINDTTEPVDRRSRDQLLGDSVMMANVRAKIAKLARSQAPI
YISGESGTGKELVAKLIHEKGPRSHQPFVPINCGAIPQELMESEFFGHKKGSFTGAIADKPGLFQTASGGTLFLDEVADL
PLHMQVKLLRAIQEKSIRPIGSDTEQPIDVRILSATHKNLPELVEQGNFRQDLYYRINVIELPLPPLRERAEDITQLAKH
ILQKLNAENNSPTKLTDTALKALAQYTFPGNVRELENILERAFTLCENGIIHQTDLQLPNNTKDAAAQTSGIKNPTQKTS
LPTQEAPLEDYLDSLEKEAITNALEKTRWNKTAAAKELGISFRALRYRLKKLGLND

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00300 YP_008207765.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR25 Protein 4e-104 53
BJAB0868_00304 YP_008211630.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains Not tested AbaR26 Protein 4e-104 53

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_2373 YP_008375042.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains BAC0467 Protein 9e-65 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_2373 YP_008375042.1 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains VFG1214 Protein 2e-123 58