Gene Information

Name : CYCME_1932 (CYCME_1932)
Accession : YP_008374606.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1954601 - 1955545 bp
Length : 945 bp
Strand : +
Note : -

DNA sequence :
ATGAAAATAAAAGTAGGAATTAGCAGTTGCTTACTGGGTAATGAGGTGCGTTTTGACGGCGGTCATAAGCACTCTCGTCT
TTGTACCGATAGTCTCTCTCGCTATTTTGAGTTTGTACCTGAATGCCCTGAAGTGGCCAGCGGCATGTCTATTCCTAGAA
AACCCATCCGCCTTATTGGCGAGGTGCAGGCGCCTAAGGTGGTGGCTGTTCACGATAATAGCGTAGATTACACCGATCAG
CTGAAGACATATAGTGAACATAAAGCGCAACAGCTAGATGAATTATGCGGTTATGTATTTATGCAAAAGTCACCTAGTTG
TGGGGTGTTTCGGGTCAAAGTCTATCAAGAAGGTGGTTATCCTGCGGCTGAACCCGGTCGTGGGGTTTATGCTAAAGCCG
TTATGGAGGCTAAGCCATTATTACCCGTTGAAGAGTCTGGCCGATTAGAAGATGCGGTGCTCAGGGAAAGCTTTATCACG
CGGGTTTATGCTTATCACAATTGGCAACAACTAAAGAAACAAGGGCTTAGTTATCAAGGCATTCTTGAATTTCACGCGAG
TTATAAGTATTGCTTAATGGCGCGTACCCCCACGCATTATGTTGAGCTTGGTCGATTATTGGCCGATGCGGGTAAGCACG
ATATTGATGACTTGGCTGAGCACTATTTTAGTTTGTTAATGGAAAATTTAAGCGTTCTTGCCACCCGTAAAACGCATACC
AATGTGTTAATGCACTTACAGGGTTATTTGAAAAAAGTGTTATCCGCTAAAGAGAAACTAGAGCTAGGTAACCTTATCGA
ACAATACCGTACTAATCAGGTGCCGCTAATTGTGCCCATTACCTTGCTGAAGCATCATTTTAACAACCACCCCGACCCCT
ACATTGAAAAACAGGCATATTTGCAACCTTACCCAGACGATTTGAGTTTACGTAATGCTATCTGA

Protein sequence :
MKIKVGISSCLLGNEVRFDGGHKHSRLCTDSLSRYFEFVPECPEVASGMSIPRKPIRLIGEVQAPKVVAVHDNSVDYTDQ
LKTYSEHKAQQLDELCGYVFMQKSPSCGVFRVKVYQEGGYPAAEPGRGVYAKAVMEAKPLLPVEESGRLEDAVLRESFIT
RVYAYHNWQQLKKQGLSYQGILEFHASYKYCLMARTPTHYVELGRLLADAGKHDIDDLAEHYFSLLMENLSVLATRKTHT
NVLMHLQGYLKKVLSAKEKLELGNLIEQYRTNQVPLIVPITLLKHHFNNHPDPYIEKQAYLQPYPDDLSLRNAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t1257 NP_805060.1 pathogenicity island protein Not tested SPI-2 Protein 3e-61 42
SC1410 YP_216397.1 inner membrane protein Not tested SPI-2 Protein 3e-61 42
ORF 319 CAB37410.1 - Not tested SPI-2 Protein 3e-61 42
orf319 NP_460354.1 inner membrane protein Not tested SPI-2 Protein 4e-61 42
STY1731 NP_456139.1 putative pathogenicity island protein Not tested SPI-2 Protein 3e-61 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_1932 YP_008374606.1 hypothetical protein VFG0490 Protein 2e-61 42