Gene Information

Name : CYCME_1892 (CYCME_1892)
Accession : YP_008374566.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : UDP-N-acetyl-D-mannosaminuronate dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1906281 - 1907546 bp
Length : 1266 bp
Strand : -
Note : -

DNA sequence :
ATGACATTTAATGTCGCCGTGATAGGCCTTGGTTATGTTGGTTTGCCATTAGCCGTTGAGTTGGGTAAACAGTTTCCAAC
GGTTGGCTTTGATATTGATAATGAGCGTATTTCTGCATTACATAAAGGCTCTGATGTTACCTTGGAAATATCAGCTGAAG
AGATCAGTGCTGCGAAGCAATTGAGATTTACAGCAAAGGCAGATGAAATATCGGCTGCGAATATCTACATTATTACGGTT
CCCACGCCGATAGATAATGGTAATAACCCAAATTTAACACCGATTAAAGAAGCGACAAAAGTGGTGGCTAACTACCTGGG
CAAAGGGGATGTTGTTATCTATGAGTCTACAGTGTACCCGGGGGCAACAGAAGAGGTTTGTGCGCCAATTCTTAGGCAGA
TATCAGGGCTGACATATAACGAAGAGTTCTTTTGTGGTTATAGCCCCGAGCGCATTAACCCGGGGGATAAAACACGTAGT
TTAACGTCTATTGTTAAAGTAACATCTGGCTCAACGCCGGATACCGCAGCGCTAGTGGATCAGCTTTACCAGTCAATTAT
TTCAGCCGGCACTTACAAGGTTAGTAGCATCAAAGTGGCTGAAGCATCCAAAGTTATTGAGAATACACAGCGCGATATTA
ATATAGCCCTTATGAACGAATTGGCGCATATTTTTAGCCGTCTTGGTATAGATACAGAAGAAGTGCTTGAGGCTGCAGGG
ACAAAGTGGAACTTCTTACCCTTTAGGCCAGGTTTAGTTGGCGGGCACTGTATTGGAGTTGATCCATATTATTTGGCGCA
TAAAGCAGAAACACTTGGGTATCACCCGCAATTGATTGCTGCTGGACGACGGATCAATGACAATATGGGGTCGTTTGTAG
TCAGTGAAGTGCTGAAACTTATGGCCAAAAAGCGTTTGAGTATTGTTGGTGCTAACGTGTTAATAATGGGTTTATCGTTT
AAAGAAAACTGCCCAGACCTACGAAATACCCGTGTAATAGGCATGGTTGAGGAGCTTGAATCATACAATGCTAACGTCGA
GGTGTACGACCCTTGGGTAAACGTTGATGACTTAAAAAATGAACAACAACTTAAGGTGATAAAGCAGCCGACTAAAGGAT
CGTACGATGCCATTATTATTGCTGTGTCGCACGATCAATTTAAAGCCCTGGGTGTGAATGCTGTTAGAGCCTTTGGGAAG
CCTAATCACGTGTTGTATGACATCAAGTATTTGTTTGCTTCAAATGAGACAGATGGGCGGTTGTAA

Protein sequence :
MTFNVAVIGLGYVGLPLAVELGKQFPTVGFDIDNERISALHKGSDVTLEISAEEISAAKQLRFTAKADEISAANIYIITV
PTPIDNGNNPNLTPIKEATKVVANYLGKGDVVIYESTVYPGATEEVCAPILRQISGLTYNEEFFCGYSPERINPGDKTRS
LTSIVKVTSGSTPDTAALVDQLYQSIISAGTYKVSSIKVAEASKVIENTQRDINIALMNELAHIFSRLGIDTEEVLEAAG
TKWNFLPFRPGLVGGHCIGVDPYYLAHKAETLGYHPQLIAAGRRINDNMGSFVVSEVLKLMAKKRLSIVGANVLIMGLSF
KENCPDLRNTRVIGMVEELESYNANVEVYDPWVNVDDLKNEQQLKVIKQPTKGSYDAIIIAVSHDQFKALGVNAVRAFGK
PNHVLYDIKYLFASNETDGRL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tviB NP_458740.1 Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-128 59
tviB NP_807945.1 VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase Virulence SPI-7 Protein 3e-128 59
cap1L AAA64651.1 type 1 capsule synthesis gene Virulence SCCcap1 Protein 3e-96 50

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_1892 YP_008374566.1 UDP-N-acetyl-D-mannosaminuronate dehydrogenase VFG0431 Protein 1e-128 59