Gene Information

Name : CYCME_0188 (CYCME_0188)
Accession : YP_008372889.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Unknown
Product : Thiamine biosynthesis protein ThiC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 185478 - 187343 bp
Length : 1866 bp
Strand : +
Note : -

DNA sequence :
ATGAGCGCCATTCCAGAAGAATTCCAGAAGAAAACCGAAGCATTGCAGCAGGCAGCTATAACGCCTTTGCCAAATTCAGA
AAAAGTTTATATTAAAGGCTCGCGTGATGATATCAACGTGCCGATGCGTAAAATATCATTAGCGGATACAGCGTCTAGTT
TTGGCGCAGAAAAAAACCCAGATGTGTATGTTTATGATTGTTCGGGTGTCTATACAGATCCAGATGCAACGATTGATTTG
CGTAAAGGGTTGCCGAATGTGCGTTTACCGTGGATTTTAGATAGGAATGATACCGAGCTGCTAGAAGGGCCCAGCTCAAC
TTTTGGCCAAGAACGGCAAAACGATCCAGCGTTAGCAAGCTTACGTTTTGAGCATATCCAAGCACCTCGACGAGCGAAAG
CGGGCGCAAACGTTAGCCAAATGCATTATGCGAAAAAAGGCATTATCACGCCTGAAATGGAATACATAGCGATTCGTGAA
AACATGAAGCGTTCTGAAATTAACGCAGAGCAACACCCCGGCGAATCCTTCGGCGCAAGTATCCCTGAGCAGATCACAGC
AGAATTTGTGCGTGACGAAGTTGCACGTGGCAGAGCGATTATTCCAGCGAATATTAACCACCCTGAAGTAGAGCCAATGA
TTATAGGCCGTAACTTCTTGGTTAAAATTAACGGTAATTTAGGTAATTCAGCGGTGACTTCTTCGATTGAAGAAGAAGTT
GATAAGATGGTATGGGGCATTCGATGGGGCGCGGATACCATCATGGACTTATCAACCGGTAAAAATATACATGAAACACG
TGAGTGGATTTTGCGTAATTCCCCTGTGCCGATTGGTACGGTGCCGATTTATCAAGCCCTTGAAAAAGTAAACGGTAAAG
CAGAAGATCTAACGTGGGAAATTTTCCGCGATACTTTGATTGAACAAGCAGAACAAGGCGTTGATTACTTTACAATCCAC
GCAGGCGTTTTACTACGTTATGTACCGATGACAGCTAAGCGGACGACCGGCATTGTGTCACGCGGTGGTTCTATTATGGC
GAAATGGTGTTTAGCACACCATAAAGAAAACTTTTTATATACGCATTTTGAAGATATCTGCGAAATTATGAAAGCGTATG
ATGTGTCATTTTCATTGGGCGATGGGTTGCGCCCTGGCTCCTTGGCCGATGCAAACGACGAAGCTCAGTTTGGTGAACTA
GAAACGTTAGGTGAACTGACGAAAATAGCTTGGAAGCACGATGTGCAAACAATGATCGAAGGTCCTGGTCACGTTCCTAT
GCATATGATCAAGGAAAACATGGATAAGCAGCTAGAGTGCTGTGATGAGGCGCCTTTTTATACCCTCGGCCCTTTAACAA
CCGATATTGCACCGGGCTATGACCATATTACATCGGGCATTGGTGCTGCGATGATTGGCTGGTTTGGTTGTGCGATGCTC
TGTTATGTTACGCCTAAAGAGCATCTGGGTTTACCGAATAAAGAAGATGTTCGAGTGGGGATTATTACCTATAAAATTGC
TGCACATGCGGCGGATTTAGCCAAAGGTCACCCCGGCGCACAAATACGAGATAATGCCTTATCAAAAGCGCGATTTGAAT
TTCGTTGGGAAGATCAGTTTAATCTTGGTTTAGACCCGGACAGAGCACGTGAATATCACGACGAAACCTTACCTAAAGAC
TCTGCCAAAGTTGCCCACTTCTGCTCCATGTGTGGGCCACATTTTTGTTCGATGAAAATTAGCCAAGATGTGCGCGATTA
TGCAGCGAATAAAGGCATAGATGCTCAAGATGCGTTGGCTGAAGGGATGGCTGAAAAAGCAGGCGAGTTTAAAAGCAAAG
GTGCCGAGCTATATAAGAAGGTTTAA

Protein sequence :
MSAIPEEFQKKTEALQQAAITPLPNSEKVYIKGSRDDINVPMRKISLADTASSFGAEKNPDVYVYDCSGVYTDPDATIDL
RKGLPNVRLPWILDRNDTELLEGPSSTFGQERQNDPALASLRFEHIQAPRRAKAGANVSQMHYAKKGIITPEMEYIAIRE
NMKRSEINAEQHPGESFGASIPEQITAEFVRDEVARGRAIIPANINHPEVEPMIIGRNFLVKINGNLGNSAVTSSIEEEV
DKMVWGIRWGADTIMDLSTGKNIHETREWILRNSPVPIGTVPIYQALEKVNGKAEDLTWEIFRDTLIEQAEQGVDYFTIH
AGVLLRYVPMTAKRTTGIVSRGGSIMAKWCLAHHKENFLYTHFEDICEIMKAYDVSFSLGDGLRPGSLADANDEAQFGEL
ETLGELTKIAWKHDVQTMIEGPGHVPMHMIKENMDKQLECCDEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWFGCAML
CYVTPKEHLGLPNKEDVRVGIITYKIAAHAADLAKGHPGAQIRDNALSKARFEFRWEDQFNLGLDPDRAREYHDETLPKD
SAKVAHFCSMCGPHFCSMKISQDVRDYAANKGIDAQDALAEGMAEKAGEFKSKGAELYKKV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00317 YP_008207782.1 Thiamine biosynthesis protein ThiC Not tested AbaR25 Protein 0.0 77
BJAB0868_00321 YP_008211647.1 Thiamine biosynthesis protein ThiC Not tested AbaR26 Protein 0.0 77
thiC YP_001598318.1 thiamine biosynthesis protein ThiC Not tested MDA Protein 0.0 74