Gene Information

Name : CYCME_1723 (CYCME_1723)
Accession : YP_008374400.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Virulence
Product : Mismatch repair ATPase (MutS family)
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1733913 - 1736483 bp
Length : 2571 bp
Strand : +
Note : -

DNA sequence :
ATGCCTAAAAGTACCCCTACAAAAAAAGCCATCACTCCGATGATGCAACAATATTTGCGCATCAAAGAGGATCACCCCAA
TACTCTTTTATTTTACCGTATGGGGGATTTCTATGAACTGTTTCTTGATGATGCCATCAAAGCGTCTAATATACTGGGCA
TCACATTAACCAGTCGTGGGCAAATTGAAAACAAGCCTGTTCCTATGGCTGGCATCCCTCATCATGCTGCCGATGGTTAC
ATCGCTAAACTATTAAAAGCCAGTGAATGCGTTGCAATTTGCGAGCAAATTGGTGACCCTGCCACGTCTAAAGGACCTGT
TGAACGCAAGGTTGTTCGCGTTATTACCCCAGGCACCTTAACCGAAGACTCACTACTCGACTCTCATTGCGATAGTTTGC
TTTGCGCCGTTTTCGAACAAAAAAAACAATACGGTTTAGCAACACTTGATCTAGCTAGCGGGCGTTTTTTATTACAAGAA
ATAGATCATGAAGCATCGCTAAAAACCGAATTAGCGCGAATTAATCCAGCTGAAATATTAATAAGTGAAGACAGCTCTTT
ATCAACACTGTTAGCAACGCATAAAGGCCTAAATTTAATGGCTGATTGGCACTTCGATCAGCAAACAGCTACTCGACTGT
TAAATAAACAGTTTGGCACCCAGGACCTAAAAGGCTTTGGCTGCCATGCGATGACACTTGCTCTAAGTGCAGCCGGTGCA
TTACTACAGTACCTAAAAGATACGCATCAATCATCGCTACCGCATTTACAATCCATTAAGGTCATTCAACAAACAGATTT
CATTACCCTTGATGCAGCAACGCGTCAGCACCTTGAATTGGACTATCACCCAAGCGGTAATATGCATTTCACCTTATTTG
GTTTACTTAACCGTTGCAAAACCACAATGGGAACACGTCTTTTACGGCGCTGGATTCATTTACCATTACGTGATCAGAGC
ATCATAAAGCACCGCTATTTAGCCGTTGAACAATTACAAACCCAAACAATAATTGACCAGCTACAAGCAAGCCTTAAACA
AACCGGTGATATTGAACGAATCACAAGCCGAATCGCATTATTAACGGCTAGACCTCGTGACCTTGTGGTTTTACGTGACA
CACTAAAGGCAGTTCCTGCTATCCAAAACACCTTAGCTAACCTCGATGCACCACGCCTAAAAACCTTACTTGATCAAACT
GGCAACCACCAAACATTAGCCGAGCTCTTAGATAAGGCGATTGTTGACAACCCCCCAGTCTTAATACGTGATGGCGGTGT
GATCGCCAATGGTTATGACGAGAAACTCGACGAACTTAAAAACATCAGTGCGAATGCTGATCAGTTTTTACTAGAGATCG
AACTAAAGGAACGTGAATTTAGTCAAATTAGTACGCTAAAGCTTAACTATAACCGTGTGCATGGCTACTATATTGAAGTG
CCTCGTTCTCAAGCCAACAAGGTACCTGATTACTTCATTCGAAAGCAAACCCTAAAAAATGTTGAGCGCTATATTACGCC
TGAACTAAAAACATTTGAAGACAAAGTATTGCATGCAAAAGAACAAGCTTTATCTTATGAAAAAGAGCTATATAACGCCC
TACTTTTAAGCATGGCCCCACAACTTAGCGCATTACAATCATGTGCTGAAGCGCTTGCTGAGATAGACTTACTGACAAAT
TTCGCAGAACGTGCTGCCACTTTAAATTTTAATCAACCTTCTTTAAGTAATACTGCTGGCATATCAATTAAACAAGGCCG
GCACCCTATTGTAGAAAGTGTTATCGACACGCCGTTTATTGCTAATGATATTGAACTAAATTCTAGCCAAAAAATGCTCA
TTATTACGGGGCCAAATATGGGCGGAAAATCAACTTATATGAGGCAAATAGCCTTATTAACGCTGATGGCACACATTGGG
TGTTACATTCCGGCATCAGAGGCCCATTTTGGCCCTATTGATCAAATTTTTACGCGTATTGGAGCAACTGACGATCTTGC
CAGTGGGCGCTCAACCTTTATGGTAGAGATGTCGGAAACAGCTAATATCTTGCATAACGCCAGTGACAAAAGCTTAGTTT
TGATGGATGAAATTGGCCGAGGAACCAGTACTTTTGATGGCCTTTCACTGGCTTGGGCATGTGCTGATTATCTGGCAAAT
AAAACTCAACCGTTCACCTTATTTGCCACGCATTATTTTGAAATGACATCTCTGCCCGAGTCAGCCCCCACAGCCAAAAA
TGTCCACTTAGATGCTATTGAGCACGGCGACCACATTGTCTTTTTACATGCCGTTAAAGACGGTGCAGCCAATCAAAGCT
ACGGGCTACAAGTTGCCGCTTTAGCAGGCGTGCCTAAAACAGTTATCAGCAATGCTCGCCTAAAACTGGCAAGCCTTGAA
AACCAGCAAAGCAACTTAGAAAACCCCACACAAACGCATACGCAATTTGATATTTTCAACACGGCTAATAACCAAGCCAC
TACTGATTTTATTGAACAGCTGTCACCCGATGATTTAAGCCCCAAAGAAGCGCTAGAGGCCTTGTATCAGTTAAAGTCTT
TAACGAATTAA

Protein sequence :
MPKSTPTKKAITPMMQQYLRIKEDHPNTLLFYRMGDFYELFLDDAIKASNILGITLTSRGQIENKPVPMAGIPHHAADGY
IAKLLKASECVAICEQIGDPATSKGPVERKVVRVITPGTLTEDSLLDSHCDSLLCAVFEQKKQYGLATLDLASGRFLLQE
IDHEASLKTELARINPAEILISEDSSLSTLLATHKGLNLMADWHFDQQTATRLLNKQFGTQDLKGFGCHAMTLALSAAGA
LLQYLKDTHQSSLPHLQSIKVIQQTDFITLDAATRQHLELDYHPSGNMHFTLFGLLNRCKTTMGTRLLRRWIHLPLRDQS
IIKHRYLAVEQLQTQTIIDQLQASLKQTGDIERITSRIALLTARPRDLVVLRDTLKAVPAIQNTLANLDAPRLKTLLDQT
GNHQTLAELLDKAIVDNPPVLIRDGGVIANGYDEKLDELKNISANADQFLLEIELKEREFSQISTLKLNYNRVHGYYIEV
PRSQANKVPDYFIRKQTLKNVERYITPELKTFEDKVLHAKEQALSYEKELYNALLLSMAPQLSALQSCAEALAEIDLLTN
FAERAATLNFNQPSLSNTAGISIKQGRHPIVESVIDTPFIANDIELNSSQKMLIITGPNMGGKSTYMRQIALLTLMAHIG
CYIPASEAHFGPIDQIFTRIGATDDLASGRSTFMVEMSETANILHNASDKSLVLMDEIGRGTSTFDGLSLAWACADYLAN
KTQPFTLFATHYFEMTSLPESAPTAKNVHLDAIEHGDHIVFLHAVKDGAANQSYGLQVAALAGVPKTVISNARLKLASLE
NQQSNLENPTQTHTQFDIFNTANNQATTDFIEQLSPDDLSPKEALEALYQLKSLTN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
mutS AAA80578.1 DNA mismatch repair protein Virulence SPI-1 Protein 0.0 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_1723 YP_008374400.1 Mismatch repair ATPase (MutS family) VFG0562 Protein 0.0 55