Gene Information

Name : CYCME_0146 (CYCME_0146)
Accession : YP_008372847.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Unknown
Product : Integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 150946 - 151968 bp
Length : 1023 bp
Strand : +
Note : -

DNA sequence : 
ATGTCCAATTTCAATAGTCCTTCAGAGAATAAGTCAATTTTTCGACCACAATCCAAACGTTTAATGGATCAGGTTCGAGA
AGTTCTTCGGTATCATCATTATGCCTTGCGTACTGAAGAGTCGTATATCAAATGGATCTTAGCTTTTATCCGTTTTAATA
ATAAAAGGCACCCTAACGAATTGGGTAAGGCTGACATTGAGGCATTTTTGTCAGATATGGCACTGAATAAGAACTATTCG
GCCTCTTCTCAGAATCTTGCAATGAATGCGATTGTTTTTTTGTATAAAAAGGTTCTTGATATGCCTGTGGCGGAGAATAT
TTCGGCGGCACGATCCAAAAAACCAGTGCGAATTCCTGTTGTTTTGAGTAAAGGTGAGGTGGTTGAGCTTTTAAAACATA
TGCGGGGAGTGAGGGGTTTGATGGCTCGTTTAATGTATGGCGGCGGCTTAAGGGTATTGGAGGTGTCGCGCTTACGGGTA
CAAGATATAGATTTTGCTAATGGCTATCTTATGATTAGAGATAGCAAGGGTGGTAATGAGAGAAAAACACCTTTGGCGGC
TACGGTTGTAACGGATTTAAAGTTACAGCTAGAAAAAGCCAGGTCATTATTTGAGAAAGATCTTGCAGCGGGTGAAGCGA
ATGTTTACTTACCGGGTGCGTTGGCTAAAAAATACCCTAAGGCAGCTTCAAGTTGGGAGTGGCAATATGTATTCCCATCT
AAGAATTTATCAGTCGACCCACGAGATGGTGAAATAAGGCGTCATCACCTTAATGAGTCGGGTATTCAAAAATCTATTCG
TGAGGCAAAGCAAAAAGCCAATATCAATAAAAGAGTAACGAGTCATACCTTAAGGCATTCGTTTGCGACACATTTGTTGG
AAGCCGGTACAAATATTCGTGTGGTGCAAAAATTATTGGGCCATAAAGATGTTAAAACCACTGAAATTTACACCCATGTA
TTGCAAGAAAACATGGATGGGGTGATCAGCCCCTTAGAACGTTTAGAGGGATTGAATGAATAG

Protein sequence : 
MSNFNSPSENKSIFRPQSKRLMDQVREVLRYHHYALRTEESYIKWILAFIRFNNKRHPNELGKADIEAFLSDMALNKNYS
ASSQNLAMNAIVFLYKKVLDMPVAENISAARSKKPVRIPVVLSKGEVVELLKHMRGVRGLMARLMYGGGLRVLEVSRLRV
QDIDFANGYLMIRDSKGGNERKTPLAATVVTDLKLQLEKARSLFEKDLAAGEANVYLPGALAKKYPKAASSWEWQYVFPS
KNLSVDPRDGEIRRHHLNESGIQKSIREAKQKANINKRVTSHTLRHSFATHLLEAGTNIRVVQKLLGHKDVKTTEIYTHV
LQENMDGVISPLERLEGLNE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
intI1 AFL65913.1 class 1 integrase Not tested SGI1-J6 Protein 2e-52 46
intI CAJ77082.1 Integrase Not tested AbaR1 Protein 3e-72 46
intI1 ACY75520.1 integrase Not tested Tn6060 Protein 2e-71 46
intI1 YP_005797130.1 integrase Not tested AbaR4e Protein 4e-72 46
intI1 AGF35060.1 IntI1 integrase Not tested SGI1 Protein 3e-72 46
intI1 ACY75535.1 integrase Not tested Tn6060 Protein 2e-71 46
intI1 YP_005797145.1 integrase Not tested AbaR4e Protein 4e-72 46
intI1 AGK06930.1 IntI1 integrase Not tested SGI1 Protein 3e-72 46
intI1 AGF34986.1 IntI1 integrase Not tested SGI1 Protein 2e-71 46
intI1 ACN81019.1 IntI1 integrase Not tested AbaR5 Protein 4e-72 46
intI1 AGK06967.1 IntI1 integrase Not tested SGI1 Protein 3e-72 46
intI1 AGF35026.1 IntI1 integrase Not tested SGI1 Protein 2e-71 46
intI1 AGK07013.1 IntI1 integrase Not tested SGI1 Protein 3e-72 46
intI1 CAB46685.1 DNA integrase Not tested Not named Protein 2e-71 46
unnamed AAL08437.1 Tn21 integrase IntI1 Not tested SRL Protein 3e-71 46
intI1 AGK07071.1 IntI1 integrase Not tested SGI1 Protein 3e-72 46
unnamed ACF06155.1 class 1 integrase Not tested Tn5036-like Protein 4e-72 46
intI1 AAK02045.1 integrase Not tested SGI1 Protein 2e-71 46
intI1 AFV53119.1 IntI1 integrase Not tested AbGRI2-1 Protein 3e-72 46
intI1 AGK07098.1 IntI1 integrase Not tested SGI1 Protein 4e-72 46
intI1 ABZ01842.1 IntI1 Not tested SGI2 Protein 2e-71 46
EC042_4092 YP_006098375.1 integrase Not tested Tn2411 Protein 5e-72 46
intI1 AGK36642.1 IntI1 integrase Not tested AbaR26 Protein 3e-72 46
intI1 ABB48427.1 IntI1 integrase Not tested SGI1 Protein 3e-72 46
intI CAJ77028.1 Integrase Not tested AbaR1 Protein 2e-71 46
intI YP_001844881.1 integrase Not tested AbaR20 Protein 4e-72 46
int1 YP_005160012.1 integrase Not tested Not named Protein 4e-56 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_0146 YP_008372847.1 Integrase VFG1028 Protein 2e-71 46