Gene Information

Name : CYCME_0129 (CYCME_0129)
Accession : YP_008372830.1
Strain : Cycloclasticus zancles 7-ME
Genome accession: NC_021917
Putative virulence/resistance : Unknown
Product : transposase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 136941 - 137246 bp
Length : 306 bp
Strand : +
Note : -

DNA sequence :
ATGAGTAAGAAGTTTACAAACGATCTAAAGCTTGAATGCGTTGAGCTAGTCACTGTTAAAGGGTATTCAACTAAACAAGT
CGCCCAAGACATGAATGTTGGCTATTCCAGTTTACAAAAATGGGTACGCCAGTATCGCAAAGAACAATTAGGTATTACCC
CTAAAACATCTGCGTTAACCCCAGACCAAATCCGTATCCAAGAGCTAGAGAAAAAACTTAGACAAGCAGAAAGTGACAAT
GCCCTGTTAAAAAAGGCGTCAGCCTTCTTCGCTATGGAAATGACCAACGGCAACAAGTCGCGTTAA

Protein sequence :
MSKKFTNDLKLECVELVTVKGYSTKQVAQDMNVGYSSLQKWVRQYRKEQLGITPKTSALTPDQIRIQELEKKLRQAESDN
ALLKKASAFFAMEMTNGNKSR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
trp1329A CAB46577.1 IS1329 transposase A Not tested HPI Protein 2e-25 62
tnpA CAB61575.1 transposase A Not tested HPI Protein 6e-25 61
orfA ACX47959.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-17 52
VPI2_0009c ACA01826.1 transposase OrfAB subunit A Not tested VPI-2 Protein 3e-17 52
VC1790 NP_231425.1 transposase OrfAB subunit A Not tested VPI-2 Protein 4e-17 52
orfA AGK06911.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-17 52
orfA YP_001217330.1 transposase OrfAB subunit A Not tested VPI-2 Protein 4e-17 52
unnamed AGK06948.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-17 52
orfA AGK06994.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-17 52
orfA AGK07052.1 IS1359 transposase; OrfA Not tested SGI1 Protein 3e-17 52
unnamed ACU09431.1 IS911 transposase orfA Not tested LEE Protein 3e-20 48
aec66 AAW51749.1 Aec66 Not tested AGI-3 Protein 3e-21 48
ECO111_3778 YP_003236113.1 putative IS602 transposase OrfA Not tested LEE Protein 4e-21 48
unnamed AAC31483.1 L0004 Not tested LEE Protein 2e-20 48
Z5088 NP_290240.1 hypothetical protein Not tested LEE Protein 3e-20 48
ECs4535 NP_312562.1 hypothetical protein Not tested LEE Protein 3e-20 48
api80 CAF28554.1 putative transposase Not tested YAPI Protein 2e-15 44
insN YP_002152325.1 transposase for insertion sequence element IS911 Not tested Not named Protein 7e-16 43
RS05 AAP82950.1 putative transposase Not tested PAPI-2 Protein 7e-13 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
CYCME_0129 YP_008372830.1 transposase VFG1123 Protein 1e-17 52
CYCME_0129 YP_008372830.1 transposase VFG0784 Protein 9e-21 48