Gene Information

Name : B841_03475 (B841_03475)
Accession : YP_008370665.1
Strain : Corynebacterium maris DSM 45190
Genome accession: NC_021915
Putative virulence/resistance : Virulence
Product : sensor kinase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 732210 - 732902 bp
Length : 693 bp
Strand : +
Note : COG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

DNA sequence :
ATGACAGCGAAGATTCTCGTCGTGGACGACGACCACGCGATCTCCGAGATGCTCACCATCGTGTTGGAGGCCGAAGGCTT
CGAATCGATCGCCGTCAATGAGGGCACCGAGGCCGTCCCGGCGTTCCAACAGCACCAGCCGGACCTGATTTTGCTGGACC
TCATGCTGCCGGGGATGAACGGCGTCGACATCTGCCGCACCATCCGCCAGGAGTCCTCGGTGCCGATCGTCATGCTGACC
GCGAAAACGGACACCGTCGACGTGGTCCTGGGGCTGGAGTCCGGCGCCGACGACTACATGACCAAGCCCTTCAAGCCGAA
GGAGCTGGTCGCCCGCATCCGGGCGCGCCTGCGCCGCACGGAAACCGCCCCGAGCGAGATGATCGAGGTCGGCGACCTGA
GCATCGACGTGGCCGAGCACACCGTCAAGCGCGGCGACGAGGAAATCAGCCTCACCCCGCTCGAGTTCGACCTGCTGGTG
CAGATGGCGCGCAAACCCGGCCAGGTGTTCAGCCGCGAAGAGCTGTTGGAAAACGTGTGGGGCTACCGGCACGCCTCCGA
CACCCGGTTGGTCAACGTCCACGTCCAGCGCCTGCGCGCCAAGATCGAGCAGGACCCGGAAGAGCCGCAGATCGTGCTGA
CCGTGCGCGGCGTGGGATATAAGACCGTCAAACCGGAAGATTTCCGAGATTAG

Protein sequence :
MTAKILVVDDDHAISEMLTIVLEAEGFESIAVNEGTEAVPAFQQHQPDLILLDLMLPGMNGVDICRTIRQESSVPIVMLT
AKTDTVDVVLGLESGADDYMTKPFKPKELVARIRARLRRTETAPSEMIEVGDLSIDVAEHTVKRGDEEISLTPLEFDLLV
QMARKPGQVFSREELLENVWGYRHASDTRLVNVHVQRLRAKIEQDPEEPQIVLTVRGVGYKTVKPEDFRD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 5e-46 45
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 8e-46 45

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B841_03475 YP_008370665.1 sensor kinase AE000516.2.gene3505. Protein 1e-74 69
B841_03475 YP_008370665.1 sensor kinase NC_012469.1.7685629. Protein 3e-51 48
B841_03475 YP_008370665.1 sensor kinase HE999704.1.gene2815. Protein 2e-48 47
B841_03475 YP_008370665.1 sensor kinase NC_002952.2859905.p0 Protein 4e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_009782.5559369.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_002951.3237708.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_007622.3794472.p0 Protein 4e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_002758.1121668.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_003923.1003749.p0 Protein 4e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_009641.5332272.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_013450.8614421.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_007793.3914279.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_002745.1124361.p0 Protein 5e-52 46
B841_03475 YP_008370665.1 sensor kinase NC_012469.1.7686381. Protein 2e-45 44
B841_03475 YP_008370665.1 sensor kinase AF155139.2.orf0.gene Protein 4e-42 43
B841_03475 YP_008370665.1 sensor kinase NC_007793.3914065.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_002758.1121390.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_010079.5776364.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_002952.2859858.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_007622.3794948.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_003923.1003417.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_013450.8614146.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase NC_002951.3238224.p0 Protein 3e-41 42
B841_03475 YP_008370665.1 sensor kinase AE016830.1.gene1681. Protein 2e-44 42
B841_03475 YP_008370665.1 sensor kinase BAC0125 Protein 4e-36 42
B841_03475 YP_008370665.1 sensor kinase NC_011595.7057856.p0 Protein 9e-39 41
B841_03475 YP_008370665.1 sensor kinase NC_010410.6002989.p0 Protein 9e-39 41
B841_03475 YP_008370665.1 sensor kinase NC_010400.5986590.p0 Protein 5e-39 41
B841_03475 YP_008370665.1 sensor kinase CP000675.2.gene1535. Protein 6e-41 41
B841_03475 YP_008370665.1 sensor kinase CP001138.1.gene2239. Protein 1e-39 41
B841_03475 YP_008370665.1 sensor kinase CP000034.1.gene2186. Protein 8e-40 41
B841_03475 YP_008370665.1 sensor kinase CP001918.1.gene3444. Protein 6e-40 41
B841_03475 YP_008370665.1 sensor kinase BAC0596 Protein 1e-39 41
B841_03475 YP_008370665.1 sensor kinase BAC0039 Protein 8e-40 41
B841_03475 YP_008370665.1 sensor kinase CP000647.1.gene2531. Protein 2e-40 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B841_03475 YP_008370665.1 sensor kinase VFG1563 Protein 3e-46 45
B841_03475 YP_008370665.1 sensor kinase VFG1702 Protein 3e-46 45
B841_03475 YP_008370665.1 sensor kinase VFG1390 Protein 3e-37 42
B841_03475 YP_008370665.1 sensor kinase VFG1389 Protein 2e-33 42