Gene Information

Name : B841_03030 (B841_03030)
Accession : YP_008370576.1
Strain : Corynebacterium maris DSM 45190
Genome accession: NC_021915
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 640057 - 640785 bp
Length : 729 bp
Strand : -
Note : COG1121 ABC-type Mn/Zn transport systems, ATPase component

DNA sequence : 
ATGACCGTGAATCCCACTTCGCCCGCCGCCGAGGTCGCCGGCCTGACCGTCGACTACCGGTCCCACCGCGCGCTTAACAA
CGTCTCGGCCACCGTCCCCGCCGGCCGGGTCACCGGCGTCATCGGGCCCAACGGCTCCGGGAAATCCACTTTGCTGAAGG
CAATGCTCGGCCTCATCCCGGCCACCGGGGAGACCACGTTCTTCGGCCTCCCCCTGTCGCGCGCCCGCAACCGCGTCGGC
TACATGCCCCAGTCCGCGTCGGTGGACTGGGACTTTCCCGCCACCGTCCGCGACGTGGTCACCATGGGCACCTACGGCTC
CCTGGGCTGGTTCCGCCGCCCCGGACGCACCCAGCGCGCCACCGCCGACGCGGCCATGGCCCAGACCGGGGTCACCGACC
TGGCCGACCGCCAAATCGGCGCCCTCTCCGGCGGCCAGCGACAGCGCGTCTTCCTCGCCCGCACCCTCGCCCAGCAGCCG
GACCTGCTGATGATGGACGAGCCCTTCGCCGGCATCGACGCCGCGAGCGAATCCGCCATCCTCGAGGCATTGGAGCAGTT
ACCGGACGTCTCCATCATGATCGTGCACCACAACCTCGCCACCGTACGAGAGCTGTGCGACGACGTGATCATCCTCAAAG
AAGGCCGCCTCGTCGCCGCCGGGCCCGTCGCTGACGCCCTGACCGAAGAGAACCTCCAGGCCGCCTACGACATCCGGGTG
CGTGCCTGA

Protein sequence : 
MTVNPTSPAAEVAGLTVDYRSHRALNNVSATVPAGRVTGVIGPNGSGKSTLLKAMLGLIPATGETTFFGLPLSRARNRVG
YMPQSASVDWDFPATVRDVVTMGTYGSLGWFRRPGRTQRATADAAMAQTGVTDLADRQIGALSGGQRQRVFLARTLAQQP
DLLMMDEPFAGIDAASESAILEALEQLPDVSIMIVHHNLATVRELCDDVIILKEGRLVAAGPVADALTEENLQAAYDIRV
RA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitB NP_457256.1 Iron transport protein, ATP-binding component Virulence SPI-1 Protein 2e-42 43
sitB NP_806465.1 iron ABC transporter ATP-binding protein Virulence SPI-1 Protein 2e-42 43
sitB NP_461783.1 ATP-binding protein Virulence SPI-1 Protein 4e-43 43
sitB YP_217782.1 iron transporter: fur regulated Virulence SPI-1 Protein 4e-43 43
sitB AAD41066.1 SitB Virulence centisome 63 pathogenicity island Protein 3e-43 43
ef0093 AAM75296.1 EF0093 Not tested Not named Protein 2e-39 42
EF0575 NP_814340.1 cationic ABC transporter ATP-binding protein Not tested Not named Protein 2e-39 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B841_03030 YP_008370576.1 ABC transporter BAC0400 Protein 1e-52 51
B841_03030 YP_008370576.1 ABC transporter BAC0440 Protein 2e-43 44
B841_03030 YP_008370576.1 ABC transporter BAC0350 Protein 2e-43 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B841_03030 YP_008370576.1 ABC transporter VFG0526 Protein 2e-43 43