Gene Information

Name : B841_11655 (B841_11655)
Accession : YP_008372290.1
Strain : Corynebacterium maris DSM 45190
Genome accession: NC_021915
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone protein ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2535442 - 2538000 bp
Length : 2559 bp
Strand : -
Note : COG0542 ATPases with chaperone activity, ATP-binding subunit

DNA sequence :
ATGAGCCAGTTCAACCCCACCACGAAGACGCAGGAAGCCATCCAGACGGCCCTCCAGCAGTCTTCCGCCAACGGCAACCC
CGACATCCGGCCCGCGCACCTGCTGGCTGCGATCCTGGGGCAGGAGGACGGCGTCGCCGCGCCGGTGCTCAAAGCCACCG
GCGTCGACCCCGACACGATTATCCGCGAAGCCAACGAACTCATCGACGGCTACCCGAAGGCCGAGGGCGCCGGCATGGCT
AACCCGAACTTCAACCGCGACGCGCTCAACGCCATGACCGCCGCGCAGGAGCTCGCCGGTGAACTCGGCGACGAATACGT
CTCCACCGAGGTGCTGCTCGCCGGCGTCGCCCGCGGCAAGTCCGACGCCGCGGAGCTGCTGACCAAGCGCGGCGCCACCT
ATGACGCGATCAAGGAGGCCTTCCCGGCGGTGCGTGGCTCCAAGAAGGTCACCACCCAGGACCCGGAGGGTCAGTTCCAG
GCCCTGGAGAAGTACTCCACCGACCTGACCGCCCGGGCGCGCGAAGGCCGCATCGATCCGGTCATCGGCCGCGACCAGGA
GATCCGCCGCGTCGTGCAGGTGCTCAGCCGCCGCACGAAGAACAACCCCGTGCTCATTGGCGAGCCCGGCGTCGGCAAGA
CCGCGATCGTGGAAGGCCTCGCCCGCCGCATGGTCGCCGGCGACGTCCCGGAATCGCTCAAGGGCAAGACCCTGGTCTCG
CTGGACCTGTCCGCCATGGTCGCGGGCGCGAAGTACCGTGGCGAATTCGAGGAGCGGCTCAAGGCCGTCCTCGAGGAGAT
CAAGGAATCCGACGGCCAGATCATCACCTTCATCGATGAGCTGCACACCATCGTCGGCGCCGGTGCGTCCGGCGAAGGCG
CCATGGACGCGGGCAACATGATCAAGCCGATGCTCGCCCGCGGTGAACTGCGACTGGTCGGCGCCACGACCCTGGACGAG
TACCGCAAGTACATCGAGAAGGACGCCGCCCTCGAGCGCCGTTTCCAGCAGGTCTACGTCGGTGAGCCCAGCGTGGAAGA
CACCATCGGCATCCTGCGCGGCCTCAAGGAACGCTACGAAGTCCACCACGGCATCCGCATCCAGGATTCCGCCCTGGTCG
CGGCCTCCGAGCTGTCCAACCGCTACATCACCAACCGCTTCCTGCCGGACAAGGCCATCGACCTGGTCGACGAGGCCGGT
TCGCGTCTGCGCATGGAGATCGACTCCTCCCCGGAGGAGATCGACGAACTCGAGCGCATCGTCCGCCGCCTCGAGATCGA
GGAGATCGCGCTGCAGAAGGAGACCGACGCGGCCTCCCAGGAACGACTGGCCGACCTGCAGATCCAGCTCGCCGACGAAC
GCGAGAAACTCGGTGAGCTCAAGGCCCGCTGGGCCAACGAGAAGGGCGCGATCGACCAGGTCCAGGCGGTGAAGGAGGAG
CTCGAGCAGCTGCGCAACGAGTCCGAGATCGCCGAGCGCGACGGTGACTACGCACGCGTCTCCGAACTGCGCTACGGGCG
CATCCCCGAGCTCGAGAAGCAGCTCGAGGACGCTGAGACCGCGGCGGAGGACCGTCACGGATCCGGCATGTTGGCCGAGG
AAGTCACCCCCGACGTCATCGCCGACGTCGTCTCCGCCTGGACCGGCATCCCGGCCGGCAAGATGATGCAGGGCGAGACC
GAGAAGCTGCTGCACATGGAGTCCGTGCTGGGCAAACGCGTCGTCGGCCAGCACGAGGCCGTGGGCGCCGTCTCCGATGC
GGTGCGCCGCTCGCGCGCCGGGGTCTCCGACCCGAACCGACCGATCGGCTCCTTCCTCTTCCTCGGCCCCACTGGCGTGG
GTAAGACGGAGCTGGCCAAGACGCTGTCGGAGTTTCTCTTCGACGACGAGCGTTCCATGGTGCGCATCGACATGTCCGAG
TACGGGGAGAAGCACTCCGTCTCCCGCCTGGTCGGCGCCCCTCCGGGATACGTCGGTTACGAGACCGGCGGCCAGCTCAC
CGAGGCCGTCCGTCGTCGCCCGTACAGCCTCGTGCTCTTCGACGAGGTGGAGAAGGCCCATCCGGACGTCTTCGACGTGC
TGCTGCAGGTGCTGGACGACGGTCGCCTCACCGACGGCCAGGGGCGCACGGTGGATTTCCGCAACACCGTCATCATCCTG
ACCTCCAACCTGGGCGCCGGCGGCGACCGCGAGCAGATCATGGCGGCGGTGAAGTCGGCCTTCAAGCCGGAGTTCATCAA
CCGTCTCGACGACGTGGTCGTCTTCGAGCCCCTGTCGCAGGAACAGCTGGTCGGTATCGTCGACATCCAGCTGGGCGCGC
TCGCCGAGCGACTGTCCGAACGCCGCCTGACCCTGCGGGTCTCCGACGCGGGCAAGAGTTGGCTCGCGGACCGCGGTTAT
GACCCGGCCTTCGGCGCCCGACCGCTGCGTCGCCTGATCCAGCAGGCGATCGGCGACAAGCTGGCCAAGAAGCTGCTGGC
TGGTGACGTGCGCGACGGCGACACCGTGCACGTGGACGTCGCCGATGGCGGCGAGTACCTGGACATCAACGCGGTCTAA

Protein sequence :
MSQFNPTTKTQEAIQTALQQSSANGNPDIRPAHLLAAILGQEDGVAAPVLKATGVDPDTIIREANELIDGYPKAEGAGMA
NPNFNRDALNAMTAAQELAGELGDEYVSTEVLLAGVARGKSDAAELLTKRGATYDAIKEAFPAVRGSKKVTTQDPEGQFQ
ALEKYSTDLTARAREGRIDPVIGRDQEIRRVVQVLSRRTKNNPVLIGEPGVGKTAIVEGLARRMVAGDVPESLKGKTLVS
LDLSAMVAGAKYRGEFEERLKAVLEEIKESDGQIITFIDELHTIVGAGASGEGAMDAGNMIKPMLARGELRLVGATTLDE
YRKYIEKDAALERRFQQVYVGEPSVEDTIGILRGLKERYEVHHGIRIQDSALVAASELSNRYITNRFLPDKAIDLVDEAG
SRLRMEIDSSPEEIDELERIVRRLEIEEIALQKETDAASQERLADLQIQLADEREKLGELKARWANEKGAIDQVQAVKEE
LEQLRNESEIAERDGDYARVSELRYGRIPELEKQLEDAETAAEDRHGSGMLAEEVTPDVIADVVSAWTGIPAGKMMQGET
EKLLHMESVLGKRVVGQHEAVGAVSDAVRRSRAGVSDPNRPIGSFLFLGPTGVGKTELAKTLSEFLFDDERSMVRIDMSE
YGEKHSVSRLVGAPPGYVGYETGGQLTEAVRRRPYSLVLFDEVEKAHPDVFDVLLQVLDDGRLTDGQGRTVDFRNTVIIL
TSNLGAGGDREQIMAAVKSAFKPEFINRLDDVVVFEPLSQEQLVGIVDIQLGALAERLSERRLTLRVSDAGKSWLADRGY
DPAFGARPLRRLIQQAIGDKLAKKLLAGDVRDGDTVHVDVADGGEYLDINAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-99 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
B841_11655 YP_008372290.1 ATP-dependent chaperone protein ClpB VFG2084 Protein 2e-106 43
B841_11655 YP_008372290.1 ATP-dependent chaperone protein ClpB VFG2076 Protein 1e-109 41