|
Name : clpV1 (REMIM1_PF00476) Accession : YP_008369070.1 Strain : Genome accession: NC_021911 Putative virulence/resistance : Virulence Product : type VI secretion system ATPase protein ClpV1 Function : - COG functional category : - COG ID : - EC number : - Position : 507886 - 510540 bp Length : 2655 bp Strand : + Note : - DNA sequence : GTGGATGTCGCGCATTGGCTTCGCTCCCTTCTTGATATTGCGGCGTTTTCCGCCGTTTTCGAAGAGCTCAAGCTCTCCTC GGAAATGCTGAGAACGGAGCTGGACGCGGCGATCGCCGACATTCCGCGGGAGGCCGGCGCCGCACTGGCGCTCTCCGCCA ACCTGCTGGCCCTTGGCCGGGAATCCTTCCTGGTTGCATCGCTGCAGTGCGGCCGTAATGTCGTGCTACTGGCCGACCTG CTCGCAGCCCTGACCGGCGATTCGGCATTGCGGGTGGTTGTGCGCGGCATTGCTCCCTCGATACGCAATCTCGACCGGGC AATGCTCGACAAATTGCTGGAGAAGGCGGCCGCTGGCCCGTCGGACCAGCTTTCGGTGCCCACCGCGACATCGGCAGGCA ATGAATTTCTGCGGCTCTACACGCACGACATGACGGCCGACGCCCGCGCGGGCCGCATCGATCCTGTTATCGGCCGCGAC GCTGAGTTGCGGCAGCTGATCGATATACTGACGCGCCGTCGGCAGAACAACCCGATCCTGGTCGGCGAGGCTGGTGTCGG CAAGACTGCTGTGGCCGAAGCGCTCGCATTGGAGATCGCCGCCGGCAATATTCCGGCCCGGCTGAAGGATGTGAAGCTGC TGCTGCTGGATCTGAGCCTGCTGCAGGCCGGCGCCGGCGTCAAAGGCGAGTTCGAACGGCGCCTGCATGGCGTGGTCGAC GCGGTAAAGACGTCACCGGAACCGATCATCCTGTTCATTGACGAGGCGCACGGGCTGATCGGCGCCGGCGGACAGGCAGG GCAAGGCGATGCCGCAAACATCCTGAAACCGGCTTTGGCGCGCGGAGAACTCAGGACTATCGCGGCAACGACCTGGAGCG AATATAAACGCTTCATCGAGAAAGATGCGGCCCTGACCCGCCGCTTCCAGACCGTGCATGTCCGCGAGCCGGACGAAGAG GCTGCAATCCGGATGCTGCGCGGCGTGGCGCAAAGCCTGAAAATCCATCACAAGGTGCGCATTCGCGACGAGGCGATCGT CGCCGCCGTCCGCCTTTCGGCGCGATACCTGCCGGACCGGCAGCTTCCCGATAAGGCGATCAGCCTGATCGACACGGCTG CCGCCGCCGTGGCGCTGGCTCGCCAGACGAGGCCGGAGGCTTTGAAACAGCTTACCGATGAACGCGATCTCTTGGAAACC GAGGCTAACTGGCTTGCGCGAGAACCCGAGACACCGGAAAAGGCCGCCCGGCTTGGCGAAATCGCCGTCAAGCAGCAGGA GATCGTTGCGCAGATCGAAGCGCTCCGGTCGCAGTTCGAGGAAGAAAATCGGCTGGTCCGCGAGGCCGACCGGCTGGAGG ATTTCTTCTCGCCGGACGATGCCATCGTCCCGTTGGCGCCGGCGGACAGTGGCGACGGCACGAATGTCGCGCCTTTCCCG CCGCAGGCCATGACCACGGAAGCCGCCCGCGCCGCCTTTGCCGTGACCGAACGGACACTCGCGGCGGTGGCCGATCAAAC GGCCCTATTGCCGCGCGTCGTCGACAAGGACGTCGTTGCATCAATCGTTGCCCGCTGGACCGGAATTCCTGTCGGCAAGC TGTTGGCCGACCAGATCGAAACCGTCAAGACACTGGATGCCCGCCTGAAGGAGAGGGTGCTCGGCCAGGACGCTGCGATC GAACGCATCGCTTCGGCCATGCGGGCCGCCCGCGCCGGACTTTCCGATCCGCGCCGGCCGCCGGCCGTCTTCCTGCTCGT CGGCATGTCCGGCACCGGCAAGACCGAGACGGCGCTGTCGCTTGCCGACATGCTCTATGGCGGCAGCCGGTATCTCACGA CCATCAACATGTCCGAGTTCAAGGAGGAGCATAAGATTTCCATGCTTCTCGGCTCGCCCCCCGGTTACGTCGGTTACGGC GAAGGCGGCGTGCTGACCGAGGCGGTGAGGCGCAGGCCCTATGGGGTGCTGCTGCTCGACGAGATCGACAAGGCCCATCC CGGCGTTCAGGAAATCTTCTACCAGGTGTTCGACAAGGGAACGCTGCGCGACGGCGAAGGCCGCGACATCGATTTCAAGA ACACCACCATCGTTATGACCGCCAATACCGGTTCGGAAATGATCGCCGCACTTGCCGCCGATCCCGAGACGATGCCGGAG GCGGAAGCGCTGGAGGCGATGCTGCTGCCGGAATTGCAGAAGCATTTCAAGCCGGCCTTCCTCGGCCGCACGACGGTGCT GCCCTTCATGCCGCTTGGGCCGGAGACGCTGTCCGGCATCGTCGATATCCAGATCGGCCGCATCCGCGAGCGGGTGGGCG CCAGCTACGGCGCGGCGCTTTCGCTCTCGCCGCAAGCGCGCGAGGCGCTGATTTCCCGCGGCCGCACGAGCGAGATGGGC GCTCGCGCAATCGAGGTCATGATCGCCCGCGACCTCCTGCCTGTTCTTTCGACCTATTTCCTCGATGCCGTCGCGGCCGG GAAGAAGATCAAAGGGATCGCCATCAATTATGACGGCCATCGCTTCGGCCTCGACGCCGAGGAGGCCGCCGCACAGGAAT TCGGCACGCCGGGGGAAAGCCGGTTGTCGGATGAAGTAGCCCCGGGCCGCAAGCGCACTCGGGGAGCAGGACGAAGAAAG GCGACTACGCCTTAG Protein sequence : MDVAHWLRSLLDIAAFSAVFEELKLSSEMLRTELDAAIADIPREAGAALALSANLLALGRESFLVASLQCGRNVVLLADL LAALTGDSALRVVVRGIAPSIRNLDRAMLDKLLEKAAAGPSDQLSVPTATSAGNEFLRLYTHDMTADARAGRIDPVIGRD AELRQLIDILTRRRQNNPILVGEAGVGKTAVAEALALEIAAGNIPARLKDVKLLLLDLSLLQAGAGVKGEFERRLHGVVD AVKTSPEPIILFIDEAHGLIGAGGQAGQGDAANILKPALARGELRTIAATTWSEYKRFIEKDAALTRRFQTVHVREPDEE AAIRMLRGVAQSLKIHHKVRIRDEAIVAAVRLSARYLPDRQLPDKAISLIDTAAAAVALARQTRPEALKQLTDERDLLET EANWLAREPETPEKAARLGEIAVKQQEIVAQIEALRSQFEEENRLVREADRLEDFFSPDDAIVPLAPADSGDGTNVAPFP PQAMTTEAARAAFAVTERTLAAVADQTALLPRVVDKDVVASIVARWTGIPVGKLLADQIETVKTLDARLKERVLGQDAAI ERIASAMRAARAGLSDPRRPPAVFLLVGMSGTGKTETALSLADMLYGGSRYLTTINMSEFKEEHKISMLLGSPPGYVGYG EGGVLTEAVRRRPYGVLLLDEIDKAHPGVQEIFYQVFDKGTLRDGEGRDIDFKNTTIVMTANTGSEMIAALAADPETMPE AEALEAMLLPELQKHFKPAFLGRTTVLPFMPLGPETLSGIVDIQIGRIRERVGASYGAALSLSPQAREALISRGRTSEMG ARAIEVMIARDLLPVLSTYFLDAVAAGKKIKGIAINYDGHRFGLDAEEAAAQEFGTPGESRLSDEVAPGRKRTRGAGRRK ATTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| aec27 | YP_851418.1 | ATPase | Not tested | PAI II APEC-O1 | Protein | 2e-113 | 47 |
| aec27 | AAQ96721.1 | Aec27 | Not tested | AGI-1 | Protein | 2e-113 | 47 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpV1 | YP_008369070.1 | type VI secretion system ATPase protein ClpV1 | VFG2076 | Protein | 2e-127 | 51 |
| clpV1 | YP_008369070.1 | type VI secretion system ATPase protein ClpV1 | VFG2084 | Protein | 5e-109 | 45 |
