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Name : REMIM1_PA00003 (REMIM1_PA00003) Accession : YP_008366884.1 Strain : Genome accession: NC_021906 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis CapD-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 1051 - 3018 bp Length : 1968 bp Strand : + Note : - DNA sequence : ATGCCGCGTGCTGCCAAACGCGCTCTCGCCTTGCTGGTGGATTCCGGTCTTTGTGTCCTGACGATCTGGCTGGCTTATTG CTTCCGTCTGAACGAATGGACGGTGCTAACAGGCGTGCAGTGGTTGCCGGTCTTCGTTTCCTTGTGCATGGCGCTTCCCA TCTTCATCGTCATGGGCATGTATCGGGCGATCTTCCGTTACGCCAACATGGCCGCTTTCATTGCCGTTCTAAAAGCCATT GCGATCTACGGTGTCGCCTTCATGACGATATTTACGGCGCTCAGCGTCCCGGGCGTTCCGAGAACCGTCGGCATTCTCCA GCCCTTCCTGCTGCTGATTGCGATCGGCCTGTCGCGCTTGGGTATCCGTTATTGGCTCGGGGACACTTACCAGCGTATCC TTCACCAGAACACGCTCGCCAAGGTGTTGATCTATGGGGCGGGAAATGCCGGGCGGCAACTCGCCGGCGCTCTGACGAAC AGCGCCGAACTCAATGTCGTCGGCTACCTCGATGATGATCCGCGCCTTAAGGGCGGCATCATGGGCGGTTTGCCGATCTA TGACCCGTCGGATCTTCCGGTGCTCGCCGAAACACTTGGCGTGCACAACGTGCTTCTTGCTCTTCCATCCGCATCGCGGC AGCGTCGCAATGAAATTCTCGAGCATATCCGCAAAGCCAGGGTGAACGTCCGGACTTTGCCGGATCTCACCGCGCTGGCT CAGGGACGAGTCGCGGTTTCCGATATTCGTGAGCTGGAGATCGAAGACCTGCTCGGCAGGGAAGCGGTTGCGCCGCGGCA AGAGCTGCTCGACAAGGCGATGCGCAACAAGGTGGTGATGGTCACGGGTGCCGGCGGCTCTATCGGCGGCGAGTTATGCC GCCAGATTCTGCGCAACGCGCCTTCAAGCCTCATCCTCATAGATCAGAACGAGTTTGCACTTTATAATATTCATGCCGAA TTGCTGAAGCTGGCCGAAGTTTACAAGCATGAGGGGCTGCAGATCGTGCCGATCCTTTGTTCCGTCCGCGACCAGGATCG CATGGAACATATCATGGAAAGCTGGCGGCCTCAGACGCTTTATCACGCCGCCGCTTACAAGCATGTGCCCCTCGTCGAAC ACAACGCCGTGGAAGGCATCAAGAACAATGTCATGGGGACATTGATCACCGCACGTGCGGCAAATAAATACGGCGTCTCG AATTTCGTGCTGATCAGCACCGACAAAGCCGTGCGCCCGACGAATGTGATGGGTGCCAGCAAGAGGCTGGCGGAGATGGT ACTGCAGGCGCTTGCGGCAGAGCTGACCGCTGACAGACTGCGGACAAATTTCTCGATGGTCCGCTTCGGAAATGTCCTCG GTTCCTCCGGATCCGTCGTGCCGCTGTTCCGGCAGCAGATCAAGGAAGGCGGCCCGGTTACCCTGACGCATCCGAAGATA ACCCGCTATTTCATGACCATTTCGGAAGCCTCGCAACTTGTCATCCAGGCGGGCGCCATGGCCGAGGGCGGCGATGTTTT CCTGCTCGATATGGGCGAGCCCGTCCGCATTGCGGATCTCGCCCGCAAGATGGTCGAACTGTCCGGATTGACCGTCCGGG ACCTGGATAATCCAGAGGGGGACATCGAGCTTGCCGTTACCGGCCTGCGGCCCGGCGAGAAGCTTTATGAAGAACTGCTG ATCGGCGATAACCCCGAGACAACTGAACATCCGCGGATTATGAAGGCGCGCGAGGATTTCCTGTTCTGGGCAGAACTTTC GAAGAAGCTCAACTCGCTCAATGCGTCGTTGGACAGAAACGACATGGTCGCGGCGCGCGCGACCTTGGCAGAACTCGTTT CCGGCTATTCCTCAACGGGCGAGGTTTCAGATCTTGCGTTCACCGGGGCCGAAACCAATCCGGCGCATGAAGATGTCAAC GCGCTAGCCTCAGGCGCAGGAAATCAGCTTCGAACCACAGGTGCATAG Protein sequence : MPRAAKRALALLVDSGLCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSLCMALPIFIVMGMYRAIFRYANMAAFIAVLKAI AIYGVAFMTIFTALSVPGVPRTVGILQPFLLLIAIGLSRLGIRYWLGDTYQRILHQNTLAKVLIYGAGNAGRQLAGALTN SAELNVVGYLDDDPRLKGGIMGGLPIYDPSDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRKARVNVRTLPDLTALA QGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAGGSIGGELCRQILRNAPSSLILIDQNEFALYNIHAE LLKLAEVYKHEGLQIVPILCSVRDQDRMEHIMESWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKYGVS NFVLISTDKAVRPTNVMGASKRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQQIKEGGPVTLTHPKI TRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELSGLTVRDLDNPEGDIELAVTGLRPGEKLYEELL IGDNPETTEHPRIMKAREDFLFWAELSKKLNSLNASLDRNDMVAARATLAELVSGYSSTGEVSDLAFTGAETNPAHEDVN ALASGAGNQLRTTGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 9e-81 | 43 |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 2e-82 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REMIM1_PA00003 | YP_008366884.1 | polysaccharide biosynthesis CapD-like protein | VFG0029 | Protein | 2e-108 | 49 |
| REMIM1_PA00003 | YP_008366884.1 | polysaccharide biosynthesis CapD-like protein | VFG1300 | Protein | 5e-81 | 45 |
