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Name : gabD-1 (REMIM1_CH00095) Accession : YP_008362902.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Unknown Product : succinate-semialdehyde dehydrogenase (NADP(+)) 1 Function : - COG functional category : - COG ID : - EC number : 1.2.1.79 Position : 101401 - 102885 bp Length : 1485 bp Strand : - Note : - DNA sequence : ATGGCTTTCACCACCGCACTGACCAGGCACGTTGCCTTTTCCTCGCCGCTGCTGCGCGATGCCGGCTATATCAACGGCGT CTGGACGCCGGGCGACGCCGCCGCAAAGACCTTCGATGTGCTGAACCCGGCAACCGGCGAGCTGCTCGCCTCCCTGCCCG ATATGGGCGCAGCCGAAACGCGGGCGGCGATCGATGCGGCCTATGCCGCCCAGCCGGCCTGGGCTGCCCGCCCGGCCAAG GAACGCAGCCAGATCCTGCGCAAATGGTTCGACCTGATAGTCGCCAATGCCGATGCGCTCGCGGCGATCCTGACCGCCGA AATGGGCAAGCCCTTCCCCGAAGCGCGCGGTGAGATCCTTTATGCCGCCGCCTATATCGAATGGTATGCGGAAGAGGCCA AGCGCATTTACGGCGAGACGATCCCGGCGCCGTCCCAGGACAAGCGCATGATCGTCATCAAGCAGCCGGTCGGCGTCGTC GGTACGATCACGCCGTGGAATTTCCCGGCGGCGATGATTGCCCGCAAGATCGCGCCGGCGCTTGCCGTCGGCTGCACTGT CGTGTCGAAGCCGGCCGAGCAGACGCCGCTGACGGCGATTGCCCTTGCCGTGCTCGCCGAACAGGCCGGCATTCCGGCCG GCGTCTTCAATCTCATCGTCGGGGTCGATGGCCCGGCGATCGGCCGCGAGCTCTGCGGCAATGACAAGGTGCGCAAGATC AGCTTCACCGGCTCGACCGAGGTCGGCCGTATCCTGATGCGGCAATGCGCCGACCAGATCAAGAAGGTGAGCCTGGAGCT CGGCGGCAACGCGCCGTTTATTGTCTTCGATGATGCTGATCTCGACGCTGCCGTCGAGGGCGCGATCGCCTCCAAATATC GCAATGCCGGCCAGACCTGCGTTTGCGCCAACCGCCTCTATATCCAGTCCGGCGTCTATGACGCCTTTGCCGCGAAGCTT GCCGCCAAGGTCGCCGACATGTCGGTCGGCGACGGGTTCAGGCCCGGTGTCGAGATCGGGCCACTGATCGACGAGCAGGG TCTTGCGAAGGTGGAGGACCATGTCGGCGACGCGGTTGCCAAGGGCGCCAAGATTCTGACCGGCGGCAAGCGCATCGACG GCGCCGGCACCTTCTTTGCGCCGACAGTGCTGACCGGCGTGACCCGCGATATGACGGTGGCGCGCGAGGAAACCTTCGGG CCGGTGGCGCCGCTCTTCCGCTTCGAGACGGCCGAGGACGTCATCACTCAGGCCAATGATACGGAATTCGGCCTGGCCGC CTATTTTTATGCCGGCGACCTCAAGAAGGTCTGGCGGGTGGCGGAAGCGCTGGAATACGGGATGATCGGCATCAATACCG GGCTGATGTCGTCGGAGACGGCGCCATTCGGCGGCATCAAGCAATCCGGTCTCGGCCGCGAGGGCTCGCGCCACGGCGCC GACGATTATCTGGAGATGAAATATCTCTGCATTGGCGGCCTCTGA Protein sequence : MAFTTALTRHVAFSSPLLRDAGYINGVWTPGDAAAKTFDVLNPATGELLASLPDMGAAETRAAIDAAYAAQPAWAARPAK ERSQILRKWFDLIVANADALAAILTAEMGKPFPEARGEILYAAAYIEWYAEEAKRIYGETIPAPSQDKRMIVIKQPVGVV GTITPWNFPAAMIARKIAPALAVGCTVVSKPAEQTPLTAIALAVLAEQAGIPAGVFNLIVGVDGPAIGRELCGNDKVRKI SFTGSTEVGRILMRQCADQIKKVSLELGGNAPFIVFDDADLDAAVEGAIASKYRNAGQTCVCANRLYIQSGVYDAFAAKL AAKVADMSVGDGFRPGVEIGPLIDEQGLAKVEDHVGDAVAKGAKILTGGKRIDGAGTFFAPTVLTGVTRDMTVAREETFG PVAPLFRFETAEDVITQANDTEFGLAAYFYAGDLKKVWRVAEALEYGMIGINTGLMSSETAPFGGIKQSGLGREGSRHGA DDYLEMKYLCIGGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| orf17 | AAO17183.1 | Orf17 | Not tested | tcd island | Protein | 8e-120 | 61 |
| cur_1509 | YP_001800903.1 | NAD-dependent aldehyde dehydrogenase | Not tested | Not named | Protein | 5e-66 | 41 |
