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Name : REMIM1_CH00792 (REMIM1_CH00792) Accession : YP_008363571.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Virulence Product : polysaccharide biosynthesis CapD-like protein Function : - COG functional category : - COG ID : - EC number : - Position : 823156 - 825096 bp Length : 1941 bp Strand : - Note : - DNA sequence : ATGCCGCGTGCTGCCAAACGCGCGCTCGCCTTGCTGGTGGATTCCGGTCTTTGTGTCCTGACGATCTGGCTGGCTTATTG CTTCCGTCTGAACGAATGGACGGTGCTAACAGGCGTGCAGTGGTTGCCGGTCTTCGTTTCCTTGTGCATGGCGCTTCCCA TCTTCATCGTCATGGGCATGTATCGGGCGATCTTTCGTTATGCCAACATGGCCGCTTTCATTGCCGTTCTAAAAGCTATT GCGATCTACGGTGTCGCCTTCATGACGATATTTACGGCGCTCAGCGTCCCGGGCGTTCCGAGAACCGTCGGCATTCTCCA GCCCTTCCTGCTGTTGATTGCGATCGGCCTGTCGCGGTTGGGTATCCGTTATTGGCTCGGGGATACTTACCAGCGTATCC TTCACCAGAACACGCTCGCCAAGGTGTTGATCTATGGGGCGGGAAATGCCGGGCGGCAACTCGCCGGCGCTCTGACGAAC AGCGCCGAACTCAATGTCGTCGGCTACCTCGATGATGATCCGCGTCTTAAGGGCGGCATCATGGGCGGTTTGCCGATCTA TGACCCGTCGGATCTTCCGGTGCTCGCCGAAACACTTGGCGTGCACAACGTGCTTCTTGCTCTTCCATCCGCATCGCGGC AGCGTCGCAATGAAATTCTCGAGCATATCCGCAAAGCCAGGGTGAACGTCCGGACTTTGCCGGATCTCACCGCGCTGGCT CAGGGACGAGTCGCGGTTTCCGATATTCGTGAGCTGGAGATCGAAGACCTGCTCGGCAGGGAAGCGGTTGCGCCGCGGCA AGAGCTGCTCGACAAGGCGATGCGCAACAAGGTGGTGATGGTCACGGGTGCCGGCGGCTCTATCGGCGGCGAGTTATGCC GCCAGATTCTGCGCAACGCGCCTTCAAGCCTCATCCTCATAGATCAGAACGAGTTTGCACTTTATAATATTCATGCCGAA TTGCTGAAGCTGGCCGAAGTTTACAAGCATGAGGGGCTGCAGATCGTGCCGATCCTTTGTTCCGTCCGCGACCAGGATCG CATGGAACATATCATGGAAAGCTGGCGGCCTCAGACGCTTTATCACGCCGCCGCTTACAAGCATGTGCCCCTCGTCGAAC ACAACGCCGTGGAAGGCATCAAGAACAATGTCATGGGGACATTGATCACCGCACGTGCGGCAAATAAATACGGCGTCTCG AATTTCGTGCTGATCAGCACCGACAAAGCCGTGCGCCCGACGAATGTGATGGGTGCCAGCAAGAGGCTGGCGGAGATGGT ACTGCAGGCGCTTGCGGCAGAGCTGACCGCTGACAGACTGCGGACAAATTTCTCGATGGTCCGCTTCGGAAATGTCCTCG GTTCCTCCGGATCCGTCGTGCCGCTGTTCCGGCAGCAGATCAAGGAAGGCGGCCCGGTTACCCTGACGCATCCGAAGATA ACCCGCTATTTCATGACCATTTCGGAAGCCTCGCAACTTGTCATCCAGGCGGGCGCCATGGCCGAGGGCGGCGATGTTTT CCTGCTCGATATGGGCGAGCCCGTCCGCATTGCGGATCTCGCCCGCAAGATGGTCGAACTGTCCGGATTGACCGTCCGGG ACCTGGATAATCCAGAGGGGGACATCGAGCTTGCCGTTACCGGCCTGAGGCCCGGCGAGAAGCTTTATGAAGAACTGCTG ATCGGCGATAACCCCGAGACAACTGAACATCCGCGGATTATGAAGGCGCGCGAGGATTTCCTGTTCTGGGCAGAACTGTC GAAGAAGCTCAACGCGCTCAATGCGTCATTGGACCGAAACGACATGGTCGCGGCACGCTCGACCTTGGCAGAACTCGTTT CCGGCTATTCCTCAACGGGTGAGGTTTCAGATCTTGCGTTCACCGGCGCCGAAGCCAATCCGGCGCATGAAGATGTCAAC GCGCAGACTACTAGTCGCTGA Protein sequence : MPRAAKRALALLVDSGLCVLTIWLAYCFRLNEWTVLTGVQWLPVFVSLCMALPIFIVMGMYRAIFRYANMAAFIAVLKAI AIYGVAFMTIFTALSVPGVPRTVGILQPFLLLIAIGLSRLGIRYWLGDTYQRILHQNTLAKVLIYGAGNAGRQLAGALTN SAELNVVGYLDDDPRLKGGIMGGLPIYDPSDLPVLAETLGVHNVLLALPSASRQRRNEILEHIRKARVNVRTLPDLTALA QGRVAVSDIRELEIEDLLGREAVAPRQELLDKAMRNKVVMVTGAGGSIGGELCRQILRNAPSSLILIDQNEFALYNIHAE LLKLAEVYKHEGLQIVPILCSVRDQDRMEHIMESWRPQTLYHAAAYKHVPLVEHNAVEGIKNNVMGTLITARAANKYGVS NFVLISTDKAVRPTNVMGASKRLAEMVLQALAAELTADRLRTNFSMVRFGNVLGSSGSVVPLFRQQIKEGGPVTLTHPKI TRYFMTISEASQLVIQAGAMAEGGDVFLLDMGEPVRIADLARKMVELSGLTVRDLDNPEGDIELAVTGLRPGEKLYEELL IGDNPETTEHPRIMKAREDFLFWAELSKKLNALNASLDRNDMVAARSTLAELVSGYSSTGEVSDLAFTGAEANPAHEDVN AQTTSR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| SSP0063 | YP_300153.1 | capsular polysaccharide biosynthesis protein | Not tested | SCC15305cap | Protein | 1e-82 | 41 |
| cap1D | AAA64643.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 2e-81 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REMIM1_CH00792 | YP_008363571.1 | polysaccharide biosynthesis CapD-like protein | VFG0029 | Protein | 8e-111 | 47 |
| REMIM1_CH00792 | YP_008363571.1 | polysaccharide biosynthesis CapD-like protein | VFG1300 | Protein | 5e-81 | 45 |
