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Name : REMIM1_CH00772 (REMIM1_CH00772) Accession : YP_008363551.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Virulence Product : Vi polysaccharide biosynthesis TviB protein Function : - COG functional category : - COG ID : - EC number : - Position : 799599 - 800903 bp Length : 1305 bp Strand : + Note : - DNA sequence : GTGAAAATTTCAAAAGATACAATTGTTGCCGTTATTGGTTTGGGCTATGTGGGGCTGCCGCTGGCGGTCGAGTTCGGCAA AAAATTCAAAACGATCGGGTTTGACCTTTCCGAGGTCAAGGTAGCCGCCTACCGCCAGCATCGCGATCCCACAGGCGAAG TTAGTACAGTGGACCTCAAGGCTGCCATGCGGCCCGCCGGGCTCGAAGTTACCACAGATCCCAGCCAACTAGTCAGCGCT GACTTTGTAATCGTCGCTGTGCCCACCCCAGTTGATGAAGCCCACATCCCCGACTTCTCTCCGCTCATTGAAGCCTCCAC CACTGTCGGTAGGCATATGAAAGCTGGTGCGACCGTCATATACGAATCCACGGTTTATCCCGGTGCAACCGAGGAAGTCT GCATACCCATCCTCGAACGTGAATCGGGCCTTCAATGGAAACGGGACTTCAATGTGGGCTACAGCCCGGAGCGGGTCAAC CCGGGAGATCAAGAACGCACGATCACCAGAATAGTTAAGGTCGTTTCCGGGGACGTTGAAGATACCCTCCAGACCGTCGG CGAGCTTTACGAATCTATCATTAGCGCCGGTGTGTACCGTGCTAGCAGCATAAAGGTCGCCGAGGCTGCGAAAGTTATCG AAAACACTCAGCGAGACTTGAATATCGCCCTGATGAACGAGCTCGCTACCATCTTTAACCGAATGGATATCGACACGCTT GAGGTGTTACAAGCCGCTGGCACCAAATGGAACTTTTTGCCCTTCCGTCCTGGCCTCGTCGGCGGGCACTGCATCGGCGT TGATCCCTACTACCTCACCCACAAGGCCGAAAAGCTAGGCTATCACCCGCAAGTAATACTTGCCGGTCGCCGGATCAATG ACGGTATGGCAGCCTACATCGCCCAACAGGCTGTAAAGCAGTTGATCAATCTCGGCAGCAGCATAAAAGGGGCGAAGGTG ATCGTGCTGGGGCTTACTTTCAAGGAAAACTGCTCTGACTTGCGTAATTCAAAAGTAGCGGACCTAGTTGCAGAATTGCG CGAGTACGGTTGCGAGATTTTCGTACACGACCCAATCGCCGATTCCGCGGATGCAGTCAGAGAATACGGAATCGAACTGA CACCCTGGGATCGCCTGCCGATGGCTGAAGCAATTATTGCGGCTGTGCCCCATCAAGATTTCATGGCATTGCCCCTCGAA GATATCCTTTCAATGTTGAAGCCCGATGGGGTGTTCGTAGATGTTAAATCGGCGTTCGATGCCCAAAGCATTAGGGCTCG CCAGATAGCCGTATGGCGTCTCTGA Protein sequence : MKISKDTIVAVIGLGYVGLPLAVEFGKKFKTIGFDLSEVKVAAYRQHRDPTGEVSTVDLKAAMRPAGLEVTTDPSQLVSA DFVIVAVPTPVDEAHIPDFSPLIEASTTVGRHMKAGATVIYESTVYPGATEEVCIPILERESGLQWKRDFNVGYSPERVN PGDQERTITRIVKVVSGDVEDTLQTVGELYESIISAGVYRASSIKVAEAAKVIENTQRDLNIALMNELATIFNRMDIDTL EVLQAAGTKWNFLPFRPGLVGGHCIGVDPYYLTHKAEKLGYHPQVILAGRRINDGMAAYIAQQAVKQLINLGSSIKGAKV IVLGLTFKENCSDLRNSKVADLVAELREYGCEIFVHDPIADSADAVREYGIELTPWDRLPMAEAIIAAVPHQDFMALPLE DILSMLKPDGVFVDVKSAFDAQSIRARQIAVWRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1L | AAA64651.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 7e-112 | 55 |
| tviB | NP_458740.1 | Vi polysaccharide biosynthesis protein, UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-100 | 50 |
| tviB | NP_807945.1 | VI polysaccharide biosynthesis UDP-glucose/GDP-mannose dehydrogenase | Virulence | SPI-7 | Protein | 5e-100 | 50 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| REMIM1_CH00772 | YP_008363551.1 | Vi polysaccharide biosynthesis TviB protein | VFG0431 | Protein | 2e-100 | 50 |
