Gene Information

Name : REMIM1_CH04031 (REMIM1_CH04031)
Accession : YP_008366672.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4045777 - 4046484 bp
Length : 708 bp
Strand : +
Note : -

DNA sequence :
TTGGCAAAAACCATCATCGAGTTGAAGAGCGCCGATCTGACCCTTGGCAGTGCCGCCGCTTCCGTCCATGTGCTGAAGGG
CATCGACCTCGATATATTAGCCGGCGAATCCGTCGGCATTGTCGGCCCATCGGGTTCCGGCAAGTCCACCCTGCTGATGG
TGCTTGCTGGATTGGAGAAGCTCGACAGCGGTGAAATCAACATCAACGACACGCCGCTCCATGCGCTCAGCGAGGACGAG
GTCGCCGATTTCCGCGGCCGCAACATCGGCATCGTCTTCCAGTCCTTCCACCTGATTGCCAATATGACGGCGCTGGAAAA
CGTCGCCGTGCCGCTGGAACTCGCCAATATCAGCAACGCCTTCGAAATCGCCCATCGCGAGCTGAATTCCGTCGGCCTGG
GCGAACGGTTGAACCACTATCCGGGCCAACTTTCCGGCGGCGAACAGCAGCGCGTGGCGATCGCAAGGGCGCTCGCCCCC
TCGCCCGCTTTGCTGATCGCCGACGAGCCCACCGGCAATCTCGATACCGAGACCGGCCGCCAGATCGCCGACCTTCTCTT
CGCCAAACAGGCCGAACGCGGCATGACCCTGCTGCTCGTCACTCACGACGTCTCGCTTGCGAACCGCTGCTCGCGCCAGA
TCCGCGTTCGCTCCGGCCGGATCGAAGGCGACAGCGCCGCCCGCCGCAGCGAGGCGGCAATCGCATGA

Protein sequence :
MAKTIIELKSADLTLGSAAASVHVLKGIDLDILAGESVGIVGPSGSGKSTLLMVLAGLEKLDSGEININDTPLHALSEDE
VADFRGRNIGIVFQSFHLIANMTALENVAVPLELANISNAFEIAHRELNSVGLGERLNHYPGQLSGGEQQRVAIARALAP
SPALLIADEPTGNLDTETGRQIADLLFAKQAERGMTLLLVTHDVSLANRCSRQIRVRSGRIEGDSAARRSEAAIA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 2e-28 44
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-31 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-31 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-31 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REMIM1_CH04031 YP_008366672.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 9e-35 47
REMIM1_CH04031 YP_008366672.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-37 44
REMIM1_CH04031 YP_008366672.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 4e-34 41