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Name : clpB (REMIM1_CH03834) Accession : YP_008366481.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Virulence Product : ATP-dependent chaperone protein ClpB Function : - COG functional category : - COG ID : - EC number : - Position : 3857882 - 3860482 bp Length : 2601 bp Strand : - Note : - DNA sequence : ATGAATATCGAGAAATATTCCGAGCGGGTGCGCGGTTTCATCCAGTCGGCCCAGACCTATGCGCTGGCGCAGGGGCATCA GCAATTTTCACCCGAACATGTGCTCAAAGTCCTGCTCGATGACGATCAAGGCATGGCGGCGTCGCTGATCGAGCGCGCCG GCGGCGATGCCAAGGCTGCCCGCCTTGCCAATGACGCGGCCCTTGCCAAGTTGCCGAAGATATCCGGCGGCAACGGCAAC ATCTATCTGGCGCAACCGCTTGCCAAGGTGTTTTCGACCGCTGAAGAGGCGGCAAAGAAGGCCGGCGACAGTTTCGTCAC CGTCGAACGCCTGCTGCAGGCGCTGGCGATCGAAACCACGGCTTCGACCTCCTCGACGCTTAAGAATGCAGGCGTAACCG CCCAGGGCCTCAACCAGGTTATCAACGATATCCGCAAGGGGCGGACGGCGGATTCCGCCAATGCCGAGCAGGGTTTCGAC TCGCTGAAGAAATATGCGCGGGATCTCACCGGCGAGGCCCGCGAGGGCAAGCTCGATCCGGTGATCGGCCGCGACGATGA AATTCGCCGTACCATCCAGGTCCTGTCCCGTCGCACCAAGAACAATCCGGTGCTGATCGGCGAGCCGGGCGTCGGCAAGA CGGCGATCGTCGAAGGTCTGGCTCTGCGCATCGTCAACGGCGACGTGCCGGAATCGCTCAAGGACAAGAAGCTGATGGCG CTCGACATGGGCGCGCTGATTGCCGGCGCGAAATACCGCGGCGAATTCGAAGAGCGGCTGAAAGCGGTCCTCAATGAAGT TCAGGCGGAAAACGGCGAGATCATACTGTTCATTGACGAGATGCACACGCTGGTCGGCGCCGGCAAAGCGGACGGTGCGA TGGACGCCTCCAACCTTCTAAAGCCTGCGCTTGCCCGCGGCGAGCTGCATTGCGTCGGCGCAACGACGCTCGACGAATAT CGTAAACATGTCGAGAAGGATCCGGCGCTTGCCCGCCGCTTCCAGCCTGTCGTCGTCGACGAACCGACGGTCGAAGATAC GATCTCGATCCTGCGCGGACTCAAGGAAAAATACGAGCAGCATCACAAGGTTCGCATCGCCGATGCGGCGCTGGTCGCGG CCGCGACGCTGTCCAACCGCTATATCACGGATCGCTTCCTGCCCGACAAGGCGATCGATCTAATGGATGAGGCGGCGGCG CGACTGCGCATGCAGGTGGATTCCAAGCCGGAAGAACTCGATGAACTCGACCGCCGGATCATCCAGATGAAGATCGAGCG TGAGGCGCTGAAGAAGGAAACCGACGTTGCTTCCGCCGACCGGCTGAAGCGGCTGGAGACCGAACTCACCGCGCTTGAAG AGGAAGCCCATGCGCTGACGGCCCGCTGGCAGGCGGAAAAGCAGAAGCTCGGCCTTGCCGCAGATCTCAAGAAGCAGCTC GACGACGCCCGCAATGAACTGGCGATTGCTCAGCGCAAGGGTGAATTCCAGCGCGCCGGCGAGCTCACCTACGGCGTCAT TCCGGATCTCGAAAAGCAGCTGGTCGAAGCTGAGAAGCAGGATGGCGAGCGCGGTGCGATGGTGCAGGAGGTGGTCAGCC CCGACAATATCGCCCATGTCGTTTCCCGCTGGACCGGCATTCCGGTCGACAAGATGCTGGAGGGTGAACGCGACAAGCTG CTTCGGATGGAAGACGAGCTGGCGAAATCTGTGATCGGCCAGGGCGATGCGGTTCAGGCCGTGTCGCGCGCCGTCCGCCG CGCCCGCGCCGGTCTGCAAGATCCGAACCGGCCGATCGGCTCGTTCATCTTCCTCGGCCCGACCGGCGTCGGCAAGACGG AGCTTACCAAGGCACTCGCCCGCTTCCTCTTCGATGATGAAACGGCGATGGTGCGCATGGACATGTCGGAATACATGGAG AAACACTCCGTCGCCCGACTGATCGGTGCGCCTCCCGGCTATGTCGGCTATGACGAGGGCGGAGCGCTGACGGAAGCTGT GCGCCGCAGGCCTTATCAGGTCGTCCTATTCGACGAGATCGAAAAGGCGCATCCCGACGTCTTCAACATCCTGCTGCAGG TGCTGGATGACGGACGCCTGACGGACGGCCAGGGCCGGACGGTCGATTTCCGCAACACGATGATCATCATGACCTCGAAC CTCGGCGCCGAATATCTCACACAGCTGCCGGACGGCGAGGACAGCGACTCGGTTCGCGAGCAAGTGATGGAGGTCGTGCG CGGGCATTTCCGGCCGGAATTCCTGAACCGTATCGATGAAATCATCCTCTTCCACCGCCTGAAGCGCGAGGAAATGGGCG CGATCGTCGACATCCAGCTGAAGCGGCTGGTGGCGCTGTTGTCCGAACGCAAGATCGTCATCGATCTCGACGAGGAAGCC CGCCACTGGCTGGCGAATAAGGGTTACGATCCGATTTACGGCGCAAGGCCGCTGAAGCGGGTGATCCAGAAATTCGTGCA GGACCCGCTGGCCGAGCAGATCCTGTCCGGCCAGGTGCCGGATGGATCGACGGTGAAGGTGACGAACGGTTCGGACCGGC TGCAGTTCAGGACGCGGCAGACGGTGAGCGAAGCCGCGTAA Protein sequence : MNIEKYSERVRGFIQSAQTYALAQGHQQFSPEHVLKVLLDDDQGMAASLIERAGGDAKAARLANDAALAKLPKISGGNGN IYLAQPLAKVFSTAEEAAKKAGDSFVTVERLLQALAIETTASTSSTLKNAGVTAQGLNQVINDIRKGRTADSANAEQGFD SLKKYARDLTGEAREGKLDPVIGRDDEIRRTIQVLSRRTKNNPVLIGEPGVGKTAIVEGLALRIVNGDVPESLKDKKLMA LDMGALIAGAKYRGEFEERLKAVLNEVQAENGEIILFIDEMHTLVGAGKADGAMDASNLLKPALARGELHCVGATTLDEY RKHVEKDPALARRFQPVVVDEPTVEDTISILRGLKEKYEQHHKVRIADAALVAAATLSNRYITDRFLPDKAIDLMDEAAA RLRMQVDSKPEELDELDRRIIQMKIEREALKKETDVASADRLKRLETELTALEEEAHALTARWQAEKQKLGLAADLKKQL DDARNELAIAQRKGEFQRAGELTYGVIPDLEKQLVEAEKQDGERGAMVQEVVSPDNIAHVVSRWTGIPVDKMLEGERDKL LRMEDELAKSVIGQGDAVQAVSRAVRRARAGLQDPNRPIGSFIFLGPTGVGKTELTKALARFLFDDETAMVRMDMSEYME KHSVARLIGAPPGYVGYDEGGALTEAVRRRPYQVVLFDEIEKAHPDVFNILLQVLDDGRLTDGQGRTVDFRNTMIIMTSN LGAEYLTQLPDGEDSDSVREQVMEVVRGHFRPEFLNRIDEIILFHRLKREEMGAIVDIQLKRLVALLSERKIVIDLDEEA RHWLANKGYDPIYGARPLKRVIQKFVQDPLAEQILSGQVPDGSTVKVTNGSDRLQFRTRQTVSEAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY0294 | NP_454876.1 | ClpB-like protein | Not tested | SPI-6 | Protein | 2e-106 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| clpB | YP_008366481.1 | ATP-dependent chaperone protein ClpB | VFG2084 | Protein | 5e-106 | 43 |
| clpB | YP_008366481.1 | ATP-dependent chaperone protein ClpB | VFG2076 | Protein | 7e-117 | 42 |
