Gene Information

Name : REMIM1_CH03802 (REMIM1_CH03802)
Accession : YP_008366457.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Virulence
Product : aldehyde dehydrogenase (NAD(+)) protein
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 3826511 - 3828019 bp
Length : 1509 bp
Strand : +
Note : -

DNA sequence :
ATGCTGCATCAGAAAATCGTCGAGTCGCCGTTCAAGCTGAAATACGGCAACTATATCGGCGGCGAGTGGCGCGAGCCGGT
CGAAGGCAAGTATTTCGAAAACCTGACGCCGGTCACCGGCGGCAAGCTCTGCGACATTCCCCGTTCCGATGAAAAGGACA
TCAATCTCGCGCTCGACGCCGCTCACGCGGCCAAGGAAAATTGGGGCCGCACCTCCGCTGCCGAGCGCTCCAATATCCTC
ATGAAGATCGCCCAGCGCATGGAAGACAAGCTGGAATTGCTCGCGCAGGCCGAGACCTGGGACAATGGCAAGCCGATCCG
CGAAACGATGGCGGCCGACATTCCGCTGGCGATCGACCATTTCCGCTATTTCGCCTCCTGCATCCGCGCCCAGGAAGGCT
CGATCGGCGAGATCGATCACGATACGATCGCCTATCACTTCCACGAGCCGCTCGGCGTCGTCGGCCAGATCATTCCCTGG
AACTTCCCGATCCTGATGGCCACATGGAAACTGGCTCCGGCGCTTGCGGCCGGCAACTGCGTCGTCTTGAAGCCTGCCGA
GCAGACGCCGGCCTCGATCCTGCTCTGGGCTGAACTGGTCGGCGATCTGCTGCCGCCCGGCGTGCTCAACATCGTCAACG
GCTTCGGCATCGAGGCCGGCAAACCGCTGGCGACCAGCCCTCGCATCGCCAAGATCGCCTTCACCGGCGAAACGACGACA
GGCCGGCTGATCATGCAATATGCCAGCCAGAACCTCATTCCGGTGACGCTGGAACTCGGCGGCAAATCGCCGAACATCTT
CTTCGCCGATGTGATGGAGGAGGATGACGACTTCCTCGATAAGGCACTCGAAGGTTTTGCGATGTTTGCCCTCAACCAGG
GTGAAGTCTGCACCTGCCCGAGCCGCGCCCTCGTTCAGGAATCGATCTATGACCGCTTCATGGAGAAGGCCGTCAAACGT
GTCGAGGCGATCAAGCAGGGCAACCCGCTCGATCCGGCCACGATGATCGGCGCTCAGGCCTCGACCGAGCAGCTCGAAAA
GATCCTCGCCTATCTGGATATCGGCAAGCAGGAAGGAGCTCAGGTTCTGGCTGGGGGCTCGCGCAACGATCTCGGCGGGG
ACCTGGCGAACGGCTATTACGTGAAGCCGACGATCTTCAAGGGCCATAACAAGATGCGCATCTTCCAGGAGGAGATCTTC
GGACCGGTGGTCTCGGTCACGACGTTCAAAACCGAGAAGGAAGCGCTCGAAATCGCCAACGACACGCTTTACGGCCTCGG
CGCCGGCGTCTGGAGCCGCGACGCCAATCGCTGCTATCGCTTCGGCCGCGAGATCCAGGCCGGCCGCGTCTGGACCAACT
GCTACCACGCGTATCCCGCCCATGCCGCGTTTGGCGGCTACAAGCAATCGGGCATTGGCCGCGAAACCCACAAGATGATG
CTCGAGCACTACCAGCAGACCAAGAACATGCTGGTGAGCTACAGCCCGAAGGCGCTTGGTTTCTTCTGA

Protein sequence :
MLHQKIVESPFKLKYGNYIGGEWREPVEGKYFENLTPVTGGKLCDIPRSDEKDINLALDAAHAAKENWGRTSAAERSNIL
MKIAQRMEDKLELLAQAETWDNGKPIRETMAADIPLAIDHFRYFASCIRAQEGSIGEIDHDTIAYHFHEPLGVVGQIIPW
NFPILMATWKLAPALAAGNCVVLKPAEQTPASILLWAELVGDLLPPGVLNIVNGFGIEAGKPLATSPRIAKIAFTGETTT
GRLIMQYASQNLIPVTLELGGKSPNIFFADVMEEDDDFLDKALEGFAMFALNQGEVCTCPSRALVQESIYDRFMEKAVKR
VEAIKQGNPLDPATMIGAQASTEQLEKILAYLDIGKQEGAQVLAGGSRNDLGGDLANGYYVKPTIFKGHNKMRIFQEEIF
GPVVSVTTFKTEKEALEIANDTLYGLGAGVWSRDANRCYRFGREIQAGRVWTNCYHAYPAHAAFGGYKQSGIGRETHKMM
LEHYQQTKNMLVSYSPKALGFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 5e-154 64
aldA AAC12273.1 aldehyde dehydrogenase Virulence VPI Protein 2e-159 64
aldA AAK20747.1 aldehyde dehydrogenase Virulence VPI Protein 2e-159 64
aldA AAK20776.1 aldehyde dehydrogenase Virulence VPI Protein 2e-159 64
aldA-1 YP_001216300.1 aldehyde dehydrogenase Not tested VPI-1 Protein 6e-159 64
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 2e-66 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REMIM1_CH03802 YP_008366457.1 aldehyde dehydrogenase (NAD(+)) protein VFG0082 Protein 2e-154 64