Gene Information

Name : xylA (REMIM1_CH03725)
Accession : YP_008366381.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Unknown
Product : xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.5
Position : 3741397 - 3742707 bp
Length : 1311 bp
Strand : -
Note : catalyzes the interconversion of D-xylose to D-xylulose

DNA sequence :
ATGAGCACCGGATTTTTCGGCGATATCCAGAAGATCAAATATGAAGGTCCTGACAGCACCAATCCGCTCGCCTTCCGCTA
TTACCAGCCGGACGAGATCGTTCTTGGCAAGCGTATGGAAGACCATCTGCGTTTTGCGGTGGCCTATTGGCACACCTTCA
CCTGGCCGGGTGGCGACCCCTTCGGCGGCCAGACCTTCCTGCGTCCGTGGTTCGAAGACACGATGAAGGCTGCCAAGCTC
AAGGCCGATGTCGCTTTCGAATTCTTCTCGCTGCTCGGCGCGCCCTATTACTGCTTCCACGACGCCGACGTGCGCCCCGA
AGGCAAGAATTTCGCTGAAAACACCAAGAACCTCAACGAGATCGTCGATTACTTCGCCGAGAAGCAAGCGGCGACCGGCA
CCAAGCTGCTCTGGGGTACGGCGAACCTGTTCTCCAACCGCCGCTACATGTCGGGTGCGGCGACCAACCCCGATCCAGAC
GTCTTTGCTTTCGCGGCCGCGACGGTCAAGACCTGCATCGACGCCACGCAGAAGCTCGGCGGCGAGAACTACGTGCTCTG
GGGCGGACGCGAAGGTTACGAGACGCTGCTCAACACCGATCTCAAGCGCGAACTCGATCAGCTCGGCCGCTTCCTCAACC
TCGTTGTCGAATACAAGCACAAGATCGGCTTCAAGGGCACCATCCTGATCGAGCCGAAGCCGCAGGAGCCGACCAAGCAC
CAGTATGACTATGACGTCGCGACCGTTTACGGCTTCCTCAAGAAGCACGGCCTTGAAAACGAGGTGAAGGTCAATATCGA
GCAGGGGCATGCGATCCTCGCCGGCCACTCTTTCGAACACGAGCTGGCGCTCGCCAATGCGCTCGGCATCTTCGGCTCGA
TCGACATGAACCGCAACGACTACCAGTCCGGCTGGGACACCGACCAGTTCCCGAACAATGTTCCGGAAATGGCTCTTGCC
TATTACCACGTTCTAGCGGGCGGCGGCTTCAAGACCGGCGGCACCAACTTCGACGCGAAGCTGCGCCGCCAGTCGCTCGA
TCCGGCAGACCTCTTAATCGGTCATATCGGGGGCATGGACTGCTGCGCCCGCGGCCTCAAGGCGGCGGCCAAGATGATCG
AGGACAAGGCCCTGTCGCAGCCGCTTGCCGACCGTTATGCCGGTTGGGAATCGGTCGAGGCGCAGAAACTCTTCCGCGGC
GAGTATTCGCTGGATGAGATCGCGAACTGGGTCGAGAGCAAGGACGTCAACCCGCAGCCGAAATCCGGCAAGCAAGAACT
GCTCGAAAACGTCGTCAACCGTTACGTCTGA

Protein sequence :
MSTGFFGDIQKIKYEGPDSTNPLAFRYYQPDEIVLGKRMEDHLRFAVAYWHTFTWPGGDPFGGQTFLRPWFEDTMKAAKL
KADVAFEFFSLLGAPYYCFHDADVRPEGKNFAENTKNLNEIVDYFAEKQAATGTKLLWGTANLFSNRRYMSGAATNPDPD
VFAFAAATVKTCIDATQKLGGENYVLWGGREGYETLLNTDLKRELDQLGRFLNLVVEYKHKIGFKGTILIEPKPQEPTKH
QYDYDVATVYGFLKKHGLENEVKVNIEQGHAILAGHSFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYHVLAGGGFKTGGTNFDAKLRRQSLDPADLLIGHIGGMDCCARGLKAAAKMIEDKALSQPLADRYAGWESVEAQKLFRG
EYSLDEIANWVESKDVNPQPKSGKQELLENVVNRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 4e-99 49
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 5e-99 49