Gene Information

Name : rph (REMIM1_CH00369)
Accession : YP_008363162.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : -
COG ID : -
EC number : 2.7.7.56
Position : 373145 - 373864 bp
Length : 720 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGGCCTTCAGGCAGAAAAACCGACCAGATGCGCAAGGTCTCGTTCGAGCGCAATTTTTCCAAGCATGCGGAAGGCTC
CTGCCTGGTGAAATTCGGCGATACGCACGTGCTTTGCACCGCAAGCCTCGAGGAAAAGACGCCGCCGTGGCTGCGCAATA
CCGGCAAGGGCTGGGTGACGGCCGAATACGGCATGCTGCCGCGGGCGACCGGCGAGCGCATGAAGCGCGAGGCCGCCGCC
GGCAAGCAGGGTGGCCGCACGCAGGAAATCCAACGGCTGATCGGCCGGTCGCTGCGCGCCGTCGTCGACCTGCAGGCGCT
CGGCGAAAAGCAGATCACGCTCGATTGCGACGTCATCCAGGCCGATGGCGGCACACGGACGGCCTCGATCACCGGCGGCT
GGATCGCGCTTTACGACTGTCTGAAATGGATGGAAAGCCGCAACATGATCAAGGTCGACCGGGTGCTCAAGGATCACGTC
GCCGCCATCTCCTGCGGCGTCTTCGCCAACCAGGCGGTGATCGATCTCGACTACCTCGAGGATTCCTCAGCCGAGACCGA
TGCGAACTTCGTCATGACCGGCGCCGGCGGCATCGTCGAAATCCAGGGCACGGCCGAAGGCACGCCGTTCAGCGAAGAGG
AATTCAGCTCGCTGATGCGACTTGCCAAGAACGGCATCGGCGAACTCGTCGCCCTGCAGAAACAGGCCATCGCGGGATGA

Protein sequence :
MRPSGRKTDQMRKVSFERNFSKHAEGSCLVKFGDTHVLCTASLEEKTPPWLRNTGKGWVTAEYGMLPRATGERMKREAAA
GKQGGRTQEIQRLIGRSLRAVVDLQALGEKQITLDCDVIQADGGTRTASITGGWIALYDCLKWMESRNMIKVDRVLKDHV
AAISCGVFANQAVIDLDYLEDSSAETDANFVMTGAGGIVEIQGTAEGTPFSEEEFSSLMRLAKNGIGELVALQKQAIAG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 5e-54 50