|
Name : cbbT (REMIM1_CH03563) Accession : YP_008366223.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : 2.2.1.1 Position : 3560880 - 3562853 bp Length : 1974 bp Strand : + Note : catalyzes the formation of ribose 5-phosphate and xylulose 5-phosphate from sedoheptulose 7-phosphate and glyceraldehyde 3-phosphate; can transfer ketol groups between several groups; in Escherichia coli there are two tkt genes, tktA expressed during expo DNA sequence : ATGACCTCTCTCCAACAAAACGACCGGATGGCGAACGCGATCCGTTTCCTCGCCATGGACGCCGTTGAAAAGGCGAATTC CGGCCACCCTGGTATGCCGATGGGCATGGCTGACGTGGCGACGGTCCTGTTCACCAAATATCTGCGCTTCGACCCCAAGA AGCCGCATTGGCCGAACCGCGACCGCTTCGTGCTGTCGGCCGGCCATGGCTCGATGCTGCTCTATTCGCTGCTGTATCTG ACGGGTTATCCCGACATGACGATCGAGGACCTCAAGCAGTTCCGTCAGGTCGGCTCCAAGACCGCCGGACACCCTGAATA CGGCCACGCAACCGGCATCGAGACCACCACCGGCCCCCTCGGTCAGGGCATCGCCAATGCCGTCGGCATGGCGATCGCGG AACGCAAGCTGCGCGACGAATTCGGCGCGGACCTCCAGGACCACTACACCTACGTGATCAATGGCGACGGCTGCCTGATG GAGGGCATCAGCCATGAAGCCATCGCCCTTGCCGGCCACCTTAAGCTCAACAAGCTGATCCTCTTCTGGGACAACAACTC GATCACCATCGACGGCGCCGTTTCGCTGTCGGACTCGACCGATCAGATCGCCCGCTTCAAGGCCGTTCACTGGAACACGA TTGAGATCGATGGCCACGATCAGGCCGCCATCGCCGATGCAATCGAGGCCGCCCACAAGTCTGATCGCCCGACCTTCATC GCCTGCAAGACGGTGATCGGCTTCGGCGCCCCGAACAAGGCCGGCAGCCACAAGGTTCACGGCAGCCCGCTCGGCGCCGA CGAGATCGCCGCCACCCGTAGGGCGCTGAACTGGGATTACGAGCCCTTCGTCGTTCCCTCGGACGTTCTCGATGCATGGC GCGCAGCCGGCACCCGTTCCGACAATGTCGTCAAGGCATGGGAAGAAACTCTGTCCAGATCGCCGGCCAGAGCGGAATTC TCCCGCCGTATGGCAGGCGACCTGCCGGAAGGTTTCGATGCCGCGATCAGCGCATATAAGAAGAAGCTGGCCGAGACCAG GCCGACGGTCGCAACCCGCAAGGCATCCGAAGACGCGCTGGAGATCATCAACGGCTTCGTGCCGGAGACGCTTGGCGGTT CCGCCGACCTGACGCCATCGAACAACACCAAGACCAGCCAGATGCACTCGATCACGCCGACGGATTTCGCCGGCCGTTAC GTGCACTGGGGCATCCGCGAGCACGGCATGGCGTCAGCCATGAACGGCATTGCGCTGCATGGCGGCCTCATTCCCTATAG CGGCGGCTTCCTGATTTTCTCGGATTACTGCCGCCCGCCGATCCGCCTCGCTGCACTGATGGGCATCCGCGTCATCCACG TTCTGACGCATGACTCGATTGGCGTCGGAGAAGACGGCCCGACGCACCAGCCCGTCGAACAGCTCGCCGGCTTGCGCGCC ATCCCCAACCTGCTGGTCTTCCGTCCGGCCGACGCCACGGAAACGGCGGAATGCTGGCAAATCGCCATCAAGACTCACAA CCGTCCGTCGGGCCTTGCCCTGACGCGTCAGAACCTCAGCCCGGCCCGCACCGAATACAGCGAAAAGAACCTCTGCGAAC AGGGCGCCTATACGCTCGCCGGTAATGCCGACGCCAAGGTGACGATCTTCGCTTCCGGCTCGGAAGTCGAAATCGCCGTG GCCGCTCGCGCCGCTCTTGAAGCCAAGGGGGTTTCGGTCCGCGTTGTCTCGGTGCCCTGCACCGAACTGTTCTTCGAACA GCCGGAAGCCTATCGCAAGCAAGTGCTCGGCAACTCCCCGGTCAAGATCGCCGTCGAAGCCGCCGTCCGCGAGGGCTGGG ACGCCTTCATCGGACCGGAAGGCACTTTCATCGGCATGAAGAGCTTCGGCGCTTCCGGTCCGGTGAAGGACGTTTACAAG CATTTCGGCATCACCGCCGACGCCGTCGTTGCGGCTGCCGAAGCAAAGCTTTAA Protein sequence : MTSLQQNDRMANAIRFLAMDAVEKANSGHPGMPMGMADVATVLFTKYLRFDPKKPHWPNRDRFVLSAGHGSMLLYSLLYL TGYPDMTIEDLKQFRQVGSKTAGHPEYGHATGIETTTGPLGQGIANAVGMAIAERKLRDEFGADLQDHYTYVINGDGCLM EGISHEAIALAGHLKLNKLILFWDNNSITIDGAVSLSDSTDQIARFKAVHWNTIEIDGHDQAAIADAIEAAHKSDRPTFI ACKTVIGFGAPNKAGSHKVHGSPLGADEIAATRRALNWDYEPFVVPSDVLDAWRAAGTRSDNVVKAWEETLSRSPARAEF SRRMAGDLPEGFDAAISAYKKKLAETRPTVATRKASEDALEIINGFVPETLGGSADLTPSNNTKTSQMHSITPTDFAGRY VHWGIREHGMASAMNGIALHGGLIPYSGGFLIFSDYCRPPIRLAALMGIRVIHVLTHDSIGVGEDGPTHQPVEQLAGLRA IPNLLVFRPADATETAECWQIAIKTHNRPSGLALTRQNLSPARTEYSEKNLCEQGAYTLAGNADAKVTIFASGSEVEIAV AARAALEAKGVSVRVVSVPCTELFFEQPEAYRKQVLGNSPVKIAVEAAVREGWDAFIGPEGTFIGMKSFGASGPVKDVYK HFGITADAVVAAAEAKL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 9e-146 | 52 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 1e-142 | 50 |
