|
Name : lpsL (REMIM1_CH03305) Accession : YP_008365982.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Virulence Product : UDP-glucuronate 5'-epimerase Function : - COG functional category : - COG ID : - EC number : 5.1.3.12 Position : 3293314 - 3294330 bp Length : 1017 bp Strand : + Note : - DNA sequence : ATGAGCTACTTCATTACAGGCACTGCCGGCTTTATCGGTTTTCATCTGGCCAGGCGCCTGCTGCAGGAAGGGCATGAGGT GACGGGCTTCGACGGCCTCACTCCTTATTACAATGTCAAGCTCAAAGAGATGCGGCACGCGGCACTCTCTCAGTTTCCGG CCTTCCGACCTGTCATATCAATGCTTGAGGACCGGCCGGCACTGGAGGCGGCAGTCTCCGCGGCCGCGCCTGACATCCTG ATCCATCTCGCCGCGCAAGCCGGAGTCCGCTACAGCCTGGAAAATCCTGAAGCGTATATACATTCGAACGTCGAAGGCTC GTGGAACATCATGGAAATCGCCCGGCGGGTTGAAGTCCGCCATCTGATGCTGGCCTCGACATCATCGATCTATGGCGCCA ACGCGACTGTCCCCTTCCGCGAGACCGATCGCGCCGACGAGCCGCTGACCATCTATGCCGCGACGAAGAAATCGATGGAA TTGATGGCGCACAGCTATGCCCATCTCCACAAGATTCCGACGACGGCCTTCCGTTTCTTCACCGTCTATGGCCCATGGGG CCGGCCCGATATGGCGCTGTTCAAATTCGCCAAGAACATGCTCGAAGGCCAGCCGATCGAGATCTACGGCGAAGGCAATA TGAGCCGCGACTTCACCTATATCGACGACCTCATCGAAGCGATCGTCAGGTTGTCGGCAATTGCCCCGAGCGAGGAAAAT CGCCTCGGTGACGCTGGGATCGAAACGCTTTCGCGCCAGGCGCCCTTCCGCGTCGTCAATATCGGCGGCGGTCAGCCCGT CAGCCTGATGGATTTCGTGGAGACGGTGGAAAAAGCGCTCGGCCGTCGTGCTATTCGCAAGATGCTGGCAATGCAGAAGG GTGACGTGCCGCGCACCTTCGCGGCTCCCGATCTTCTCGTGGCACTGACGGGATACAAGCCAGACACGACATTGGATGTC GGCGTCAAGGCCTTCGTCGACTGGTATATCGATGTGCGTCGCGAACTGGATGCCTGA Protein sequence : MSYFITGTAGFIGFHLARRLLQEGHEVTGFDGLTPYYNVKLKEMRHAALSQFPAFRPVISMLEDRPALEAAVSAAAPDIL IHLAAQAGVRYSLENPEAYIHSNVEGSWNIMEIARRVEVRHLMLASTSSIYGANATVPFRETDRADEPLTIYAATKKSME LMAHSYAHLHKIPTTAFRFFTVYGPWGRPDMALFKFAKNMLEGQPIEIYGEGNMSRDFTYIDDLIEAIVRLSAIAPSEEN RLGDAGIETLSRQAPFRVVNIGGGQPVSLMDFVETVEKALGRRAIRKMLAMQKGDVPRTFAAPDLLVALTGYKPDTTLDV GVKAFVDWYIDVRRELDA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| cap1I | AAA64648.1 | type 1 capsule synthesis gene | Virulence | SCCcap1 | Protein | 6e-78 | 50 |
