|
Name : recG (REMIM1_CH02101) Accession : YP_008364818.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Resistance Product : ATP-dependent DNA helicase RecG Function : - COG functional category : - COG ID : - EC number : 3.6.4.12 Position : 2083795 - 2085900 bp Length : 2106 bp Strand : - Note : catalyzes branch migration in Holliday junction intermediates DNA sequence : ATGCGCCCCGCCATTCTCGATCCGCTGTTTTCCCCCATTTCGGGCCTTCCGGGCGTCGGCCCGAAGATCGCCGAACTACT CGTCAAGCTGCTCGGGCGCGAGACGGTGGAAGATTGCCGGGTCATCGATCTTCTGTTCCATGCGCCCTTCTCGCTGATCG ACCGGCGCAACCAGCCTGGGATAGGCTTGGCGCCGCAGGGTGCAATCGTAACGATCACCGCGCGCGTCGACCGCCACCAG GTGCCGCCGCGCGGCAAAAGCAATGTGCCCTACCGCGTCTTCCTGCATGACGAGACCGGCGAGCTGACACTGGTCTTCTT CCGCGGACAGGCTGCGTGGCTGGAAAAGCAGCTGCCTGTCGACGCCGAGGTGACGGTCAGCGGCAAGGTCGATTGGTTCA ATGGCCGCGCCTCGATGGTGCATCCCGACTATATCGTCAAAGCGGAGGAGGTGGAGAGCCTGCCGCTCGTCGAACCGATC TATCCGCTGACGGCCGGCCTTTCGCCGAAAACGCTGCGAAAGATCATCGACGCCGCCCTGCCGCGATTTCCGGAAATGCC GGAATGGATCAATTTGACCCTGACGCAGAAGCAGGGGCTGCCGTCGATCCGTGACAGCTTTCATATGCTGCATGAACCGC GCGATCCCTCGGATGTCGATCCGCAGGCCCCTGCCCGAAGGCGGCTTGCCTATGATGAATTTCTGGCCGGCCAACTGTCG CTCAGCCTGGTGCGCCAGAGGCTCCGCAAAGTGGCGGGCCAGCCGGTGCATGCGACCGGTGCGGTCAGCAGCAAGATCGT GAAGGCGTTGCCCTTCTCGCTCACGTCAAGCCAGAACGATGCGATCGCCGAGATTCTGAAGGACATGGCCGGCGCCGAGC GCATGCTGCGGCTGCTGCAGGGCGATGTCGGCTCCGGCAAGACGCTGGTGGCGCTGATGGCGATGGCGGCGGTGATCGAG AGCGGCGGCCAGGCGGTACTGATGGCGCCGACCGAAATCCTGGCGCGCCAGCACCACGCGACGATCTCAAAATTCGCCGC CTCCGCCGGCCTCGGCATCGAAGTCCTGACCGGTCGGACCAAGGGACGCGAAAGGGAGGAGATCCTGGAGCGCATCGCCT CCGGTGCGGCGCAGATCATTATCGGCACGCATGCGCTTTTCCAGGACAGCGTCACGTACGACAAGCTGATGCTGGCCGTC GTTGACGAACAGCATCGCTTCGGCGTGCATCAGCGCCTCCGGCTGACGGCCAAGGGCATCTCGCCGCATATGCTCGTCAT GACGGCGACGCCGATCCCGCGCACGCTGGTGCTCGCCGCCTTCGGCGACATGGACGTTTCCAAGCTCACGGAAAAACCGG TCGGCCGCAAGCCGATCCAGACAATCACGGTGCCGATGGAGCGCACCGGCGAAATTGTCGGCCGGCTGCAAAGCGCGCTT GCCGAGGGCAAGAAGGCCTACTGGATCTGCCCGCTGGTCGAAGAATCCGAAGAGCTCGACCTGATGTCGGCCGAGGAGCG GCATGCCACACTCGTAGCTGCGCTCGGCTCCGATATCGGCCTCATCCACGGCCGCATGAGCGGACCGGAGAAGGACGCGG CAATGGTAGCGTTCAAAAATGGCGAGACCCGGCTGCTCGTCGCCACCACTGTCGTCGAGGTCGGCGTCGATGTGCCGGAT GCGACGATCATGGTGATCGAACATGCCGAACGCTTCGGTCTGGCGCAATTGCACCAGCTGCGCGGCCGGGTCGGACGCGG CGACGAGGCCTCGACCTGCATCCTGCTCTACAAGGGGCCGCTCGGCGAGACAGGCCATGCCAGGCTGTCGATCATGCGGG AAACGGAGGATGGCTTCCGCATTGCCGAGGAGGATCTGAAGCTGCGCGGCGAAGGCGAATTGCTCGGCACCCGCCAGTCC GGCACGCCGGGCTTTCGCATTGCCAGCCTCGAGGCGCATGCCGATCTGCTGGAGATCGCCCGCAAGGATGCGGCTTATCT CATCGAGCGCGATCCGGAACTGACCAGCGAAAGAGGACAGGCGATCCGCACCCTGCTCTACCTCTTTCGCCGCGACGAAG CGATCCGGTTCCTGAGGGCGGGTTAG Protein sequence : MRPAILDPLFSPISGLPGVGPKIAELLVKLLGRETVEDCRVIDLLFHAPFSLIDRRNQPGIGLAPQGAIVTITARVDRHQ VPPRGKSNVPYRVFLHDETGELTLVFFRGQAAWLEKQLPVDAEVTVSGKVDWFNGRASMVHPDYIVKAEEVESLPLVEPI YPLTAGLSPKTLRKIIDAALPRFPEMPEWINLTLTQKQGLPSIRDSFHMLHEPRDPSDVDPQAPARRRLAYDEFLAGQLS LSLVRQRLRKVAGQPVHATGAVSSKIVKALPFSLTSSQNDAIAEILKDMAGAERMLRLLQGDVGSGKTLVALMAMAAVIE SGGQAVLMAPTEILARQHHATISKFAASAGLGIEVLTGRTKGREREEILERIASGAAQIIIGTHALFQDSVTYDKLMLAV VDEQHRFGVHQRLRLTAKGISPHMLVMTATPIPRTLVLAAFGDMDVSKLTEKPVGRKPIQTITVPMERTGEIVGRLQSAL AEGKKAYWICPLVEESEELDLMSAEERHATLVAALGSDIGLIHGRMSGPEKDAAMVAFKNGETRLLVATTVVEVGVDVPD ATIMVIEHAERFGLAQLHQLRGRVGRGDEASTCILLYKGPLGETGHARLSIMRETEDGFRIAEEDLKLRGEGELLGTRQS GTPGFRIASLEAHADLLEIARKDAAYLIERDPELTSERGQAIRTLLYLFRRDEAIRFLRAG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| recG | CAJ77039.1 | ATP-dependent DNA helicase | Not tested | AbaR1 | Protein | 0.0 | 66 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| recG | YP_008364818.1 | ATP-dependent DNA helicase RecG | BAC0356 | Protein | 5e-106 | 44 |
