Gene Information

Name : REMIM1_CH02083 (REMIM1_CH02083)
Accession : YP_008364800.1
Strain : Rhizobium etli Mim1
Genome accession: NC_021905
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2063578 - 2064294 bp
Length : 717 bp
Strand : +
Note : -

DNA sequence : 
ATGACAAGCCCGCCGCTGATCGAATTCAGGCAGGTCTCGAAAATCTACGGCGAGGGCGAGGCGGCGATCCGTGCGCTCGA
CCATGTCGATCTGGCGATCGCGGCCCATGAATTCGTCGCGATCATGGGTCCGTCCGGCTCCGGCAAGTCGACGGCGATGA
ACATCCTCGGCTGCCTCGACGTGCCGACATCAGGCGATTACATCTTCCAGGGTATCCCGACCAGCGGCTTCGACCGCAGC
CACCTGACGCTCCTTCGCCGCCACATGCTCGGCTTCGTCTTCCAGGGCTTCAATCTCCTGTCGCGAACCTCGGCTGTCGA
GAATGTCGAGCTACCGCTGATCTATCGCTGCATGGCCGTGCGTGAGCGGCGCGAACGGGCGCGCCAAGCTCTGGCGCTGG
TCGGTCTCACCGGGCGCGAGCACCACAAGACGCAGGAACTCTCGGGCGGCCAGCAGCAGCGCGTCGCCATCGCCCGCGCC
ATCGTCACCGAACCGGCGCTGCTGCTCGCCGATGAGCCCACCGGCAATCTCGACACCAAGACCAGCGTCGAGATCATGGA
TCTGCTGACGCGGCTGAACCGCGAGCAGGGCATCACCATCGTTATGGTCACGCATGAGCCAGATATCGCCGCCTATGCTG
AGCGGCTGCTGCGCTTTGTCGACGGCAAGCTCGAGACCGAGGTGGAGCACCGGAGGAGGGCGGATCATGTTCTTTGA

Protein sequence : 
MTSPPLIEFRQVSKIYGEGEAAIRALDHVDLAIAAHEFVAIMGPSGSGKSTAMNILGCLDVPTSGDYIFQGIPTSGFDRS
HLTLLRRHMLGFVFQGFNLLSRTSAVENVELPLIYRCMAVRERRERARQALALVGLTGREHHKTQELSGGQQQRVAIARA
IVTEPALLLADEPTGNLDTKTSVEIMDLLTRLNREQGITIVMVTHEPDIAAYAERLLRFVDGKLETEVEHRRRADHVL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 1e-27 42
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-26 42
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-28 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-28 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
REMIM1_CH02083 YP_008364800.1 ABC transporter ATP-binding protein NC_012469.1.7686878. Protein 1e-48 50
REMIM1_CH02083 YP_008364800.1 ABC transporter ATP-binding protein NC_008702.1.4606598. Protein 4e-38 46
REMIM1_CH02083 YP_008364800.1 ABC transporter ATP-binding protein CP001581.1.gene798.p Protein 7e-36 45
REMIM1_CH02083 YP_008364800.1 ABC transporter ATP-binding protein CP001581.1.gene598.p Protein 4e-36 41