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Name : REMIM1_CH00186 (REMIM1_CH00186) Accession : YP_008362987.1 Strain : Rhizobium etli Mim1 Genome accession: NC_021905 Putative virulence/resistance : Unknown Product : oligopeptide ABC transporter ATP-binding protein Function : - COG functional category : - COG ID : - EC number : - Position : 193558 - 195195 bp Length : 1638 bp Strand : + Note : - DNA sequence : ATGAGTGACATGACAGAACCGCTCCTTTCCGTCCGCGATCTCTCGGTTGCCTTTCATCAGGGCGGCGAAACCTCGCTTGC CGTCGATCGGATCTCCTTCGATATCGCCAAAGGCGAGGTCGTAGCGCTCGTCGGCGAATCGGGCTCCGGCAAATCGGTCT CGGCCAACTCGATCCTGCGCCTTCTGCCTTATCCCTCGGCAAGCCACCCCTCCGGGGAAATCCTGTTCAAGGGCAAGGAT CTCTTGAAGGCATCGGAGCGGGCGCTGCGCGAGGTGCGCGGCAATGACATCACCATGATCTTCCAGGAGCCGATGACCTC GCTCAATCCGCTTCATACGATCGAAAAGCAGATCGCCGAGATCCTCGCCCTGCACCAGGGGCTCACCGGCCAGGCGGCGC GGATGCGCGTGCTGGAACTGTTAAACCAGGTCGGCATCCGCGAGCCTGAGAAGCGGTTGAAGGCCTATCCGCACGAACTC TCCGGCGGTCAGCGCCAGCGCGTCATGATCGCCATGGCGCTCGCCAACCGGCCGGAACTGCTGATCGCCGACGAACCGAC AACAGCGCTCGACGTCACCGTACAGGCGCAGATTCTAGAGCTTCTCCGGCAGTTGAAGACGGCGCACGGCATGTCGCTGC TGTTCATCACCCACGATCTCGGCATCGTGCGCAAATTCGCCGACCGCGTCTGCGTCATGACCAAGGGCCGGATCGTCGAA ACCGGGACGGTCGAGGAGGTCTTCGCCAATCCGAAGCACGACTATACCCGCCATCTTCTCGCTTCCGAACCGCGCGGCGA GCCGCCGCTTGCCGATCCGTCGAAGCCGGTGGTGATGGAAGGCTCGGATATCCGCGTCTGGTTCCCGATCAAGGCGGGGC TGATGCGCCGCGTCGTCGATCATGTGAAGGCGGTCGACGGCATCGATCTTTCGCTGCGCGCCGGACAGACGCTCGGAGTC GTCGGCGAATCCGGTTCGGGCAAGACCACGCTCGGGCTTGCCCTCACCCGTCTGATCTCGTCGCAGGGACGGATTGCCTT TTTCGGCAAAGATATAGCCGGTTATTCTTTCAGCGAAATGCGGCCGTTACGCAACCAGCTGCAGGTCGTCTTCCAGGACC CCTACGGTTCGCTCAGCCCGCGCATGTCGGTCGGCGATATCATTGCCGAAGGGCTGAAGGTACATGAGCGCGCCTTGAGC GCCGAGGAGCGCGACCAGCGTGTCTGCTGGGCGCTGGAGGAGGTAGGCCTGGATCCGCTGACCCGCTGGCGCTATCCGCA TGAATTTTCAGGCGGCCAGCGCCAGCGCATCGCCATAGCTCGCGCCATGGTGCTGAAGCCCCGTTTCGTCATGCTCGACG AGCCGACATCCGCGCTCGACATGAGCGTGCAGGCCCAGGTCGTCGACCTCCTGCGCGATCTGCAAAAGAAACACGACCTC GCCTATCTCTTCATCAGCCACGACCTGAAGGTGGTGAAGGCGCTCGCCAACGACGTCATCGTCATGCGGTTCGGCAAGGT GGTGGAGCAAGGTCCCTCCGCGGAAATCTTCCGCGCGCCCAAGGACGATTACACCAAGGCGCTGATGGCAGCCGCGTTCA ACATCGAGGCGGTGCCGACGCCCGCCGTGCAGCAGTAA Protein sequence : MSDMTEPLLSVRDLSVAFHQGGETSLAVDRISFDIAKGEVVALVGESGSGKSVSANSILRLLPYPSASHPSGEILFKGKD LLKASERALREVRGNDITMIFQEPMTSLNPLHTIEKQIAEILALHQGLTGQAARMRVLELLNQVGIREPEKRLKAYPHEL SGGQRQRVMIAMALANRPELLIADEPTTALDVTVQAQILELLRQLKTAHGMSLLFITHDLGIVRKFADRVCVMTKGRIVE TGTVEEVFANPKHDYTRHLLASEPRGEPPLADPSKPVVMEGSDIRVWFPIKAGLMRRVVDHVKAVDGIDLSLRAGQTLGV VGESGSGKTTLGLALTRLISSQGRIAFFGKDIAGYSFSEMRPLRNQLQVVFQDPYGSLSPRMSVGDIIAEGLKVHERALS AEERDQRVCWALEEVGLDPLTRWRYPHEFSGGQRQRIAIARAMVLKPRFVMLDEPTSALDMSVQAQVVDLLRDLQKKHDL AYLFISHDLKVVKALANDVIVMRFGKVVEQGPSAEIFRAPKDDYTKALMAAAFNIEAVPTPAVQQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-99 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-85 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-85 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 5e-85 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 5e-85 | 43 |
