Gene Information

Name : SN31241_6960 (SN31241_6960)
Accession : YP_008358614.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Transposon resolvase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 711362 - 711910 bp
Length : 549 bp
Strand : +
Note : Transposon Tn1331 resolvase of root UniRef RepID=TNR4_KLEPN

DNA sequence : 
ATGACTGGACAGCGCATTGGGTATATCAGGGTCAGCACCTTCGACCAGAACCCGGAACGGCAACTGGAAGGCGTCAAGGT
TGATCGCGCTTTTAGCGACAAGGCATCCGGCAGTTCAACAGACCGGGAAGGGCTGGATTTGCTGAGGATGAAGGTGGAGG
AAGGTGATGTCATTCTGGTTAAGAAGCTCGACCGTCTTGGCCGCGACACTGCCGATATGATCCAACTGATAAAGGAATTT
GACGCTCAGGGCGTGGCAGTCCGGTTCATTGATGACGGGATCAGTACCGACGGTGATATGGGGCAAATGGTGGTCACCAT
CCTGTCGGCTGTGGCACAGGCTGAACGCCGGAGGATCCTAGAACGCACGAATGAGGGCCGACAGGAAGCAAAGCTGAAAG
GAATCAAATTTGGCCGCAGGCGTACCGTGGACAGGAACGTCGTGCTGACGCTTCATCAGAAGGGCACTGGTGCAACGGAA
ATTGCTCATCAGCTCAGTATTGCCCGCTCCACGGTTTATAAAATTCTTGAAGACGAAAGGGCCTCGTGA

Protein sequence : 
MTGQRIGYIRVSTFDQNPERQLEGVKVDRAFSDKASGSSTDREGLDLLRMKVEEGDVILVKKLDRLGRDTADMIQLIKEF
DAQGVAVRFIDDGISTDGDMGQMVVTILSAVAQAERRRILERTNEGRQEAKLKGIKFGRRRTVDRNVVLTLHQKGTGATE
IAHQLSIARSTVYKILEDERAS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tpnR ADZ05795.1 resolvase Not tested AbaR17 Protein 5e-68 97
ABTW07_3873 YP_005797121.1 transposon Tn3 resolvase Not tested AbaR4e Protein 5e-68 97
tnpR ACK44544.1 Tn2 resolvase Not tested SGI1 Protein 3e-69 90
tnpR AGK07036.1 Tn2 resolvase Not tested SGI1 Protein 3e-69 90
tnpR AGK07094.1 Tn2 resolvase Not tested SGI1 Protein 3e-69 90
tnpR ACF06167.1 resolvase Not tested Tn5036-like Protein 9e-69 90
tnpR YP_006098373.1 transposon Tn21 resolvase Not tested Tn2411 Protein 7e-28 43
tnpR AAL08439.1 resolvase TnpR Not tested SRL Protein 5e-28 43
tnpR AFV53121.1 Tn21 resolvase Not tested AbGRI2-1 Protein 5e-28 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6960 YP_008358614.1 Transposon resolvase GU371926.1.gene95.p0 Protein 4e-69 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6960 YP_008358614.1 Transposon resolvase VFG1030 Protein 2e-28 43