Gene Information

Name : SN31241_6790 (SN31241_6790)
Accession : YP_008358597.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Transcriptional regulator, AlpA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 698960 - 699166 bp
Length : 207 bp
Strand : +
Note : Predicted transcriptional regulator COG3311; Transcriptional regulator, AlpA family of Enterobacteriaceae UniRef RepID=B4TEH7_SALHS

DNA sequence :
GTGTTACTGCGTGCCGACGATCCCCTGATCGACATGAACTACATCACCAGTTTCACCGGTATGACCGATAAATGGTTTTA
CAAGCTGATCAGTGAAGGTCATTTCCCTAAACCCATCAAACTGGGGCGCAGCAGCCGCTGGTACAAAAGTGAAGTGGAGC
AGTGGATGCAGCAGCGAATTGAGGAATCACGAGGAGCAGCAGCATGA

Protein sequence :
MLLRADDPLIDMNYITSFTGMTDKWFYKLISEGHFPKPIKLGRSSRWYKSEVEQWMQQRIEESRGAAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 1e-27 99
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 2e-27 99
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 8e-21 93
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 8e-21 93
rox AAR97599.1 regulator of excision Not tested SHI-1 Protein 2e-17 70
unnamed CAE85187.1 hypothetical protein Not tested PAI V 536 Protein 1e-17 70
S3190 NP_838473.1 hypothetical protein Not tested SHI-1 Protein 3e-17 70
SF2987 NP_708761.1 hypothetical protein Not tested SHI-1 Protein 3e-17 70
ECO103_3577 YP_003223438.1 transcriptional regulator Not tested LEE Protein 2e-17 70

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6790 YP_008358597.1 Transcriptional regulator, AlpA VFG1480 Protein 6e-28 99
SN31241_6790 YP_008358597.1 Transcriptional regulator, AlpA VFG0651 Protein 8e-18 70