Gene Information

Name : SN31241_6620 (SN31241_6620)
Accession : YP_008358580.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 685243 - 686061 bp
Length : 819 bp
Strand : -
Note : UPF0380 protein yfjQ of Bacteria UniRef RepID=YFJQ_ECOLI

DNA sequence :
ATGCAATTAGCCAGTCGTTTTGGTCATGTAAATCAGATCCGTCGGGAGCGCCCACTGACACGCGAAGAACTGATGTACCA
CGTCCCGAGTATTTTTGGAGAAGACCGGCACACCTCCCGCAGTGAACGGTATGCGTACATTCCCACCATCACCGTCCTGG
AAAATCTGCAGCGGGAAGGCTTTCAGCCGTTCTTCGCCTGCCAGACCCGTGTGCGCGACCAGAGCCGCCGGGAATATACC
AAACATATGCTGCGTCTGCGGCGGGCCGGACAGATAACCGGTCAGCATGTGCCTGAAATTATTCTGCTCAACTCCCATGA
CGGTTCATCCAGCTACCAGATGTTACCCGGATATTTTCGTGCCATCTGCACCAATGGCTTGGTCTGCGGTCAGTCGCTGG
GAGAAGTCCGGGTGCCCCACCGGGGAAACGTGGTGGACAGGGTGATTGAAGGTGCTTACGAGGTGGTGGGCGTTTTTGAC
CGGATTGAGGAGAAGCGTGATGCCATGCAGTCGCTGGTCCTGCCGCCACCGGCACGCCAGGCGCTGGCACAGGCTGCGCT
GACTTACCGTTATGGTGACGAACATCAGCCCGTCACCACCGCCGGCATTCTGACACCACGACGCCGGGAGGATTACGGTA
AGGACCTGTGGAGTGCTTATCAGACCATCCAGGAGAATATGCTGAAAGGCGGGATTTCCGGTCGCAGTGCAAAAGGAAAA
CGTATCCATACCCGGACCATTCACAGCATCGACACCGATATTAAGCTCAACCGCGCATTGTGGGTGATGGCAGAAACGAT
GCTGGAGAGCCTGCGCTGA

Protein sequence :
MQLASRFGHVNQIRRERPLTREELMYHVPSIFGEDRHTSRSERYAYIPTITVLENLQREGFQPFFACQTRVRDQSRREYT
KHMLRLRRAGQITGQHVPEIILLNSHDGSSSYQMLPGYFRAICTNGLVCGQSLGEVRVPHRGNVVDRVIEGAYEVVGVFD
RIEEKRDAMQSLVLPPPARQALAQAALTYRYGDEHQPVTTAGILTPRRREDYGKDLWSAYQTIQENMLKGGISGRSAKGK
RIHTRTIHSIDTDIKLNRALWVMAETMLESLR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42096.1 hypothetical protein Not tested PAI II 536 Protein 6e-118 98
z1215 CAD33785.1 Z1215 protein Not tested PAI I 536 Protein 6e-119 98
yafZ CAE85199.1 YafZ protein Not tested PAI V 536 Protein 2e-117 97
Z1215 NP_286750.1 hypothetical protein Not tested TAI Protein 3e-114 95
Z1655 NP_287158.1 hypothetical protein Not tested TAI Protein 3e-114 95
ECO103_3587 YP_003223444.1 hypothetical protein Not tested LEE Protein 9e-110 91
unnamed CAD66201.1 hypothetical protein Not tested PAI III 536 Protein 6e-109 91
unnamed CAI43843.1 hypothetical protein Not tested LEE Protein 9e-110 90
yafZ YP_854321.1 hypothetical protein Not tested PAI I APEC-O1 Protein 6e-110 90
aec71 AAW51754.1 Aec71 Not tested AGI-3 Protein 9e-110 90
yafZ ADD91704.1 YafZ Not tested PAI-I AL862 Protein 9e-110 90
ORF_47 AAZ04456.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 5e-110 90
c5156 NP_757004.1 hypothetical protein Not tested PAI II CFT073 Protein 7e-110 90
S3199 NP_838482.1 hypothetical protein Not tested SHI-1 Protein 2e-110 89
SF2994 NP_708768.1 hypothetical protein Not tested SHI-1 Protein 2e-110 89
ORF SG86 AAN62307.1 conserved hypothetical protein Not tested PAGI-3(SG) Protein 5e-73 56
ORF C80 AAN62174.1 conserved hypothetical protein; associated with oriT region on plasmids Not tested PAGI-2(C) Protein 2e-72 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6620 YP_008358580.1 hypothetical protein VFG1615 Protein 4e-118 98
SN31241_6620 YP_008358580.1 hypothetical protein VFG1526 Protein 3e-119 98
SN31241_6620 YP_008358580.1 hypothetical protein VFG1676 Protein 3e-109 91
SN31241_6620 YP_008358580.1 hypothetical protein VFG0658 Protein 1e-110 89