Gene Information

Name : SN31241_6600 (SN31241_6600)
Accession : YP_008358578.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 684190 - 684666 bp
Length : 477 bp
Strand : -
Note : UPF0758 protein yeeS of Enterobacteriaceae UniRef RepID=YEES_ECOLI

DNA sequence :
ATGCAACAGATTTCCTTTCTGCCCGGAGAAATGACGCCCGGCGAGCGCAGTCTCATTCTGCGGGCCCTGAAAACCCTGGA
CCGCCATCTTCATGAACCCGGCGTGGCCTTCACCTCCACCCGTGCGGCACGGGAATGGCTGATTCTGAACATGGCGGGAC
TGGAGCGTGAAGAATTCCGGGTGCTGTATCTGAATAACCAGAATCAGCTGATTGCCGGTGAAACCCTCTTCACCGGCACC
ATCAACCGCACGGAAGTCCATCCCCGGGAAGTGATTAAACGTGCCCTGTACCACAATGCCGCTGCCGTGGTGCTGGCACA
CAATCACCCGTCCGGTGAAATCACCCCCAGTAAGGCTGACCGGCTTATCACCGAACGTCTGGTACAGGCACTGGGCCTGG
TGGATATCCGGGTGCCGGACCATCTGATAGTCGGTGGCAACCAGGTTTTCTCCTTTGCCGAACATGGTCTGCTTTAA

Protein sequence :
MQQISFLPGEMTPGERSLILRALKTLDRHLHEPGVAFTSTRAAREWLILNMAGLEREEFRVLYLNNQNQLIAGETLFTGT
INRTEVHPREVIKRALYHNAAAVVLAHNHPSGEITPSKADRLITERLVQALGLVDIRVPDHLIVGGNQVFSFAEHGLL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42098.1 hypothetical protein Not tested PAI II 536 Protein 4e-62 99
Z1217 NP_286752.1 RadC family DNA repair protein Not tested TAI Protein 4e-62 99
z1217 CAD33787.1 Z1217 protein Not tested PAI I 536 Protein 1e-62 99
yeeS CAI43901.1 YeeS protein Not tested LEE Protein 2e-62 99
yeeS ADD91702.1 YeeS Not tested PAI-I AL862 Protein 6e-63 99
yeeS CAI43846.1 YeeS protein Not tested LEE Protein 6e-63 99
unnamed AAL08475.1 unknown Not tested SRL Protein 3e-62 98
yeeS CAE85201.1 YeeS protein Not tested PAI V 536 Protein 2e-62 98
Z1657 NP_287160.1 RadC family DNA repair protein Not tested TAI Protein 8e-61 97
unnamed CAD66203.1 hypothetical protein Not tested PAI III 536 Protein 1e-60 97
ECO103_3589 YP_003223446.1 radC-like protein YeeS Not tested LEE Protein 3e-61 97
yeeS YP_854323.1 radC-like protein YeeS Not tested PAI I APEC-O1 Protein 2e-61 97
yeeS AAZ04458.1 putative RadC-like protein Not tested PAI I APEC-O1 Protein 2e-61 97
c5152 NP_757000.1 radC-like protein yeeS Not tested PAI II CFT073 Protein 2e-61 97
aec73 AAW51756.1 Aec73 Not tested AGI-3 Protein 2e-62 97
unnamed AAL67345.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-61 97
unnamed AAK00479.1 unknown Not tested SHI-1 Protein 4e-55 96
yeeS NP_838484.1 RADC family DNA repair protein Not tested SHI-1 Protein 6e-60 95
yeeS NP_708770.1 RADC family DNA repair protein Not tested SHI-1 Protein 6e-60 95
VC1786 NP_231421.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-18 56
VC0395_A1383 YP_001217326.1 DNA repair protein RadC Not tested VPI-2 Protein 1e-18 56
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 6e-19 56
VC0510 NP_230161.1 DNA repair protein RadC-like protein Not tested VSP-2 Protein 5e-17 54
radC AAN62140.1 putative DNA repair protein RadC Not tested PAGI-2(C) Protein 1e-18 46
radC AAN62275.1 putative DNA repair protein RadC Not tested PAGI-3(SG) Protein 5e-19 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6600 YP_008358578.1 hypothetical protein VFG1617 Protein 2e-62 99
SN31241_6600 YP_008358578.1 hypothetical protein VFG1528 Protein 4e-63 99
SN31241_6600 YP_008358578.1 hypothetical protein VFG1066 Protein 1e-62 98
SN31241_6600 YP_008358578.1 hypothetical protein VFG1678 Protein 5e-61 97
SN31241_6600 YP_008358578.1 hypothetical protein VFG0660 Protein 2e-60 95
SN31241_6600 YP_008358578.1 hypothetical protein VFG1119 Protein 3e-19 56