Gene Information

Name : SN31241_6560 (SN31241_6560)
Accession : YP_008358574.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : Toxin CbtA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 681131 - 681508 bp
Length : 378 bp
Strand : -
Note : Toxin CbtA of Enterobacteriaceae UniRef RepID=CBTA_ECOL6

DNA sequence :
ATGAACACATTACCTGTATTACCCGGGCAGGCGGCCAGTTCTCGCCCGTCTCCTGTTGAAATCTGGCAGATACTGCTCTC
CCGACTACTGGGCCAGCATTACGGCCTTACACTGAATGACACACCGTTCGCCGATGAACGTGTGATTGAGCAGCATATTG
AAGCTGGCATTTCACTGTGCGATGCAGTGAACTTTCTTGTTGAAAAATACGCACTGGTGCGTACCGACCAGCCGGAATTC
AGTGCCTGTACCCGCTCTCAGTTAATAAACAGCATCGATATCCTCCGGGCTCGCCGGGCGACTGGCCTGATGACCCGCGA
CAATTACCGAACGGTAAATAACATTACCCTGGGTAAACATCCGGGGGCGAAACAATGA

Protein sequence :
MNTLPVLPGQAASSRPSPVEIWQILLSRLLGQHYGLTLNDTPFADERVIEQHIEAGISLCDAVNFLVEKYALVRTDQPEF
SACTRSQLINSIDILRARRATGLMTRDNYRTVNNITLGKHPGAKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67389.1 L0007-like protein Not tested PAI II CFT073 Protein 8e-49 91
c5149 NP_756997.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-48 91
yeeV ADD91699.1 YeeV Not tested PAI-I AL862 Protein 6e-47 89
unnamed CAI43848.1 hypothetical protein Not tested LEE Protein 7e-47 88
aec76 AAW51759.1 Aec76 Not tested AGI-3 Protein 7e-47 88
unnamed CAD42101.1 hypothetical protein Not tested PAI II 536 Protein 3e-47 88
z5091 CAD33789.1 Z5091 protein Not tested PAI I 536 Protein 9e-46 88
Z5091 NP_290242.1 hypothetical protein Not tested LEE Protein 2e-46 87
ECs4539 NP_312566.1 hypothetical protein Not tested LEE Protein 2e-46 87
unnamed CAD66207.1 hypothetical protein Not tested PAI III 536 Protein 9e-46 87
yeeV CAE85204.1 YeeV protein Not tested PAI V 536 Protein 5e-46 87
unnamed AAC31486.1 L0007 Not tested LEE Protein 1e-46 87
unnamed ACU09433.1 conserved hypothetical protein Not tested LEE Protein 1e-46 87
unnamed AAL57575.1 unknown Not tested LEE Protein 3e-45 86
unnamed AAK00482.1 unknown Not tested SHI-1 Protein 2e-44 85
yeeV NP_838487.1 hypothetical protein Not tested SHI-1 Protein 3e-44 85
yeeV NP_708773.1 hypothetical protein Not tested SHI-1 Protein 3e-44 85
yeeV YP_854325.1 hypothetical protein Not tested PAI I APEC-O1 Protein 5e-44 84
unnamed AAL08478.1 unknown Not tested SRL Protein 2e-44 84
yeeV AAZ04461.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-43 84
unnamed AAL67342.1 intergenic-region protein Not tested PAI II CFT073 Protein 2e-43 81
ECO103_3592 YP_003223449.1 hypothetical protein Not tested LEE Protein 5e-43 81

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6560 YP_008358574.1 Toxin CbtA VFG1620 Protein 1e-47 88
SN31241_6560 YP_008358574.1 Toxin CbtA VFG1530 Protein 4e-46 88
SN31241_6560 YP_008358574.1 Toxin CbtA VFG1682 Protein 4e-46 87
SN31241_6560 YP_008358574.1 Toxin CbtA VFG0786 Protein 5e-47 87
SN31241_6560 YP_008358574.1 Toxin CbtA VFG0663 Protein 8e-45 85
SN31241_6560 YP_008358574.1 Toxin CbtA VFG1069 Protein 8e-45 84