Gene Information

Name : SN31241_6550 (SN31241_6550)
Accession : YP_008358573.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 680646 - 681134 bp
Length : 489 bp
Strand : -
Note : uncharacterized protein of Escherichia coli STEC_EH250 UniRef RepID=G2B1K6_ECOLX

DNA sequence :
ATGAAACTGGCCCTGACGCTGGAAGCCGACAGCATTAACGTGCAGGCACTGAACATGGGGCGCATTGTCGTTGACGTCGA
TGGTGTTACTCTCGCTGAACTGATTAACGTGGTCTGCGATAACGGTTACTCCCTTCGTGTTGTTGATGAATCTGACCGGA
CATCAGCAGAGCGCACGCCACCATCTGCGGCCCTTACCGGCATACGCTGCAGTACCGCGCATATCACGGCAAAGGACAAC
GCCTGGCTGTACTCGCTGTCACATCAGACGAATGACTTCGGCGAATCAGAATGGATTCATTTTACCGGTAGCGGATATCT
GTTACGTACCGATGCGTGGTCGTACCCGGTTCTGCGACTTAAACGCCTGGGCCTGTCAAAAACGTTTCGTCGTCTGATCG
TCACGCTCATTCGCCATTATGGCGTCAGTCTCATTCATCTGGATGCCTGCGCTGAATGTCTGCCGGGTCTGCCCACTTTC
GACTGGTAA

Protein sequence :
MKLALTLEADSINVQALNMGRIVVDVDGVTLAELINVVCDNGYSLRVVDESDRTSAERTPPSAALTGIRCSTAHITAKDN
AWLYSLSHQTNDFGESEWIHFTGSGYLLRTDAWSYPVLRLKRLGLSKTFRRLIVTLIRHYGVSLIHLDACAECLPGLPTF
DW

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42102.1 hypothetical protein Not tested PAI II 536 Protein 5e-69 96
unnamed CAI43904.1 hypothetical protein Not tested LEE Protein 2e-63 91
Z1223 NP_286758.1 hypothetical protein Not tested TAI Protein 1e-65 91
Z1662 NP_287164.1 hypothetical protein Not tested TAI Protein 1e-65 91
unnamed AAL08479.1 unknown Not tested SRL Protein 7e-65 91
unnamed AAL57574.1 unknown Not tested LEE Protein 1e-56 90
z5092 CAD33790.1 Z5092 protein Not tested PAI I 536 Protein 9e-63 90
unnamed AAC31487.1 L0008 Not tested LEE Protein 8e-66 90
Z5092 NP_290243.1 hypothetical protein Not tested LEE Protein 1e-65 90
unnamed ACU09434.1 conserved hypothetical protein Not tested LEE Protein 8e-66 90
ECs4540 NP_312567.1 hypothetical protein Not tested LEE Protein 1e-65 90
c5148 NP_756996.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-63 89
unnamed CAD66208.1 hypothetical protein Not tested PAI III 536 Protein 1e-62 88
yeeW CAE85205.1 YeeW protein Not tested PAI V 536 Protein 9e-63 86
yeeW ADD91698.1 YeeW Not tested PAI-I AL862 Protein 3e-61 85
yeeW CAI43849.1 YeeW protein Not tested LEE Protein 7e-62 84
APECO1_3485 YP_854326.1 hypothetical protein Not tested PAI I APEC-O1 Protein 1e-58 83
yeeW NP_838488.1 hypothetical protein Not tested SHI-1 Protein 1e-59 83
yeeW NP_708774.1 hypothetical protein Not tested SHI-1 Protein 1e-59 83
yeeW AAZ04462.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 7e-59 83
aec77 AAW51760.1 Aec77 Not tested AGI-3 Protein 3e-59 83
unnamed AAK00483.1 unknown Not tested SHI-1 Protein 8e-53 82
unnamed AAL67388.1 L0008-like protein Not tested PAI II CFT073 Protein 1e-52 82
ECO103_3593 YP_003223450.1 hypothetical protein Not tested LEE Protein 7e-60 80

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6550 YP_008358573.1 hypothetical protein VFG1621 Protein 2e-69 96
SN31241_6550 YP_008358573.1 hypothetical protein VFG1070 Protein 3e-65 91
SN31241_6550 YP_008358573.1 hypothetical protein VFG1531 Protein 4e-63 90
SN31241_6550 YP_008358573.1 hypothetical protein VFG0787 Protein 3e-66 90
SN31241_6550 YP_008358573.1 hypothetical protein VFG1683 Protein 5e-63 88
SN31241_6550 YP_008358573.1 hypothetical protein VFG0664 Protein 3e-60 83