Gene Information

Name : SN31241_6540 (SN31241_6540)
Accession : YP_008358572.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 680431 - 680628 bp
Length : 198 bp
Strand : -
Note : L0009 protein n=5 Tax=Escherichia coli RepID=C7BUP2_ECOLX

DNA sequence : 
ATGAAATCATTAACGACAGAAACGGCGCTGGATATTCTGATTGCGTGGCTGCAGGACAATATTGACTGTGAATCCGGGAT
TATCTTCGACAACGATGAGGATAGAACGGATTCAGCAGCACTGTTGCCCTGCATTGAACAGGCCAGGGAAGATATCCGTA
CCCTGCGCCAACTACAGCTTCTGCAACAGAACCGGTGA

Protein sequence : 
MKSLTTETALDILIAWLQDNIDCESGIIFDNDEDRTDSAALLPCIEQAREDIRTLRQLQLLQQNR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3594 YP_003223451.1 hypothetical protein Not tested LEE Protein 7e-18 99
ECO111_3780 YP_003236115.1 hypothetical protein Not tested LEE Protein 8e-18 97
unnamed AAK00484.1 unknown Not tested SHI-1 Protein 2e-17 97
SF3001 NP_708775.1 hypothetical protein Not tested SHI-1 Protein 3e-17 97
Z1225 NP_286759.1 hypothetical protein Not tested TAI Protein 2e-17 95
unnamed AAL08480.1 unknown Not tested SRL Protein 1e-17 95
unnamed AAL67387.1 L0009-like protein Not tested PAI II CFT073 Protein 2e-17 93
c5147 NP_756995.1 hypothetical protein Not tested PAI II CFT073 Protein 3e-17 93
unnamed AAC31488.1 L0009 Not tested LEE Protein 3e-16 88
unnamed ACU09435.1 conserved hypothetical protein Not tested LEE Protein 3e-16 88
Z5093 NP_290244.1 hypothetical protein Not tested LEE Protein 5e-16 88
ECs4541 NP_312568.1 hypothetical protein Not tested LEE Protein 5e-16 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6540 YP_008358572.1 hypothetical protein VFG0665 Protein 1e-17 97
SN31241_6540 YP_008358572.1 hypothetical protein VFG1071 Protein 5e-18 95
SN31241_6540 YP_008358572.1 hypothetical protein VFG0788 Protein 1e-16 88