Gene Information

Name : SN31241_6530 (SN31241_6530)
Accession : YP_008358571.1
Strain : Salmonella enterica USMARC-S3124.1
Genome accession: NC_021902
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 679501 - 680349 bp
Length : 849 bp
Strand : -
Note : Z1226 n=173 Tax=Enterobacteriaceae RepID=Q8GA12_ECOLX

DNA sequence :
ATGATGTCAGATATCACAGCCTCCCGTCCGGAAGTGGTCACCGGGCATACGGACGTTATTTGCTCAACCAGTATCCGCCA
CATTCTGGCTGTACGAAAGAGTACACTGCTGCAAATCGACACACTTATCCGGCAACTGGCTGAAATATCAGCAATGACAG
AAAGTATTGGCGGTAAAACCGCCCGGGACTGGGCCATGAAACAGGATTTTCGCTGCGGTTGCTGGCTGATGGAGAAACCG
GAAACCGCAATGAAAGCCATCACCCGGAATCTCGATCGCGAACTCTGGCGTGACCTGATGCAACGTTCAGGGATGCTGTC
ATTAATGGATGCACAAGCCCGTGATACATGGTACCGGTCACTGGAGTACGATAATTTTCCGGAAATCAGCGAAGCAAATA
TCCTGAGCACGTTTGAACAACTGCACCAGAACAAAGATGAAGTGTTTGAGCGAGGGGTGCTCAACGTTTTCAGAGGACTG
AGCTGGAATTACAAAACCAATTCACCCTGCAAATTTGGCAGTAAAATTATCGTCAACAATCTGGTGAGGTGGGACCGGTG
GGGGTTTCATCTTATCACCGGGCAACAGGCTGATCGACTTGCCGATCTGGAAAGAATGCTACACCTGTTCAGCGGCAAAC
CGATCCCCGACAACCGGGAAAACATCACTATTCGTCTGGATGATCACATCCAGTCTGTTCAGGGTAAAGAGGACTATGAA
GATGAGATGTTCAGCATCAGATACTTTAAGAAGGGCTCCGCGCACATCACGTTCAGGAAACCAGAGCTGGTTGACAGACT
GAATGACATTATTGCGAAATACTATCCAAATGTATTGACCGAAAGGTAA

Protein sequence :
MMSDITASRPEVVTGHTDVICSTSIRHILAVRKSTLLQIDTLIRQLAEISAMTESIGGKTARDWAMKQDFRCGCWLMEKP
ETAMKAITRNLDRELWRDLMQRSGMLSLMDAQARDTWYRSLEYDNFPEISEANILSTFEQLHQNKDEVFERGVLNVFRGL
SWNYKTNSPCKFGSKIIVNNLVRWDRWGFHLITGQQADRLADLERMLHLFSGKPIPDNRENITIRLDDHIQSVQGKEDYE
DEMFSIRYFKKGSAHITFRKPELVDRLNDIIAKYYPNVLTER

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAI43906.1 hypothetical protein Not tested LEE Protein 3e-123 94
Z1226 NP_286760.1 hypothetical protein Not tested TAI Protein 1e-124 94
unnamed AAL57572.1 unknown Not tested LEE Protein 1e-123 94
Z1664 NP_287166.1 hypothetical protein Not tested TAI Protein 1e-124 94
z1226 CAD33792.1 Z1226 protein Not tested PAI I 536 Protein 1e-121 93
S3207 NP_838489.1 hypothetical protein Not tested SHI-1 Protein 9e-123 92
unnamed CAE85207.1 hypothetical protein Not tested PAI V 536 Protein 8e-123 92
SF3002 NP_708776.1 hypothetical protein Not tested SHI-1 Protein 9e-123 92
unnamed AAK00485.1 unknown Not tested SHI-1 Protein 7e-123 92
ECO111_3781 YP_003236116.1 hypothetical protein Not tested LEE Protein 2e-123 92
ECO103_3595 YP_003223452.1 hypothetical protein Not tested LEE Protein 1e-121 91
APECO1_3484 YP_854327.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-120 90
ORF_49 AAZ04463.1 hypothetical protein Not tested PAI I APEC-O1 Protein 3e-120 90
unnamed CAD66210.1 hypothetical protein Not tested PAI III 536 Protein 1e-111 89
aec79 AAW51762.1 Aec79 Not tested AGI-3 Protein 7e-120 88

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SN31241_6530 YP_008358571.1 hypothetical protein VFG1533 Protein 6e-122 93
SN31241_6530 YP_008358571.1 hypothetical protein VFG0666 Protein 4e-123 92
SN31241_6530 YP_008358571.1 hypothetical protein VFG1685 Protein 8e-112 89